RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CACNA1EQ15878 2313 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 ASCC3Q8N3C0 2202 aaKnown RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 PATE3B3GLJ2 98 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 TAF4O00268 1085 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 DPYSL4O14531 572 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 TRDMT1O14717 391 aaKnown RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 LARGE1O95461 756 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 SEC24BO95487 1268 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 MCF2P10911 925 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 CEACAM1P13688 526 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 FDPSP14324 419 aaKnown RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 CSRP1P21291 193 aaKnown RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 NPTX2P47972 431 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 AARSP49588 968 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM1-225ENST00000560679 YWHAHQ04917 246 aaPredicted RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 GPR17Q13304 367 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 ELF2Q15723 593 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 SLC10A6Q3KNW5 377 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 DAB2IPQ5VWQ8 1189 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 APBB1IPQ7Z5R6 666 aaPredicted RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 DNAJB7Q7Z6W7 309 aaPredicted RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 DAW1Q8N136 415 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 IFT74Q96LB3 600 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 LPIN3Q9BQK8 851 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 ARHGAP28Q9P2N2 729 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 DAXXQ9UER7 740 aaPredicted RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 CCL26Q9Y258 94 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 CYP46A1Q9Y6A2 500 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 TNRC6BQ9UPQ9 1833 aaKnown RBP10.81□□□□□ -0.68
TPM1-225ENST00000560679 ABCA7Q8IZY2 2146 aa10.81□□□□□ -0.68
TPM1-225ENST00000560679 PTPRDP23468 1912 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 K7ERI5 159 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 HYAL3O43820 417 aaPredicted RBP10.8□□□□□ -0.68
TPM1-225ENST00000560679 ATG13O75143 517 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 HARSP12081 509 aaKnown RBP10.8□□□□□ -0.68
TPM1-225ENST00000560679 ARSAP15289 507 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 ATF6P18850 670 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 U2AF2P26368 475 aaKnown RBP eCLIP10.8□□□□□ -0.68
TPM1-225ENST00000560679 RPA1P27694 616 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 ALDH1A3P47895 512 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 GRSF1Q12849 480 aaKnown RBP eCLIP10.8□□□□□ -0.68
TPM1-225ENST00000560679 KARSQ15046 597 aaKnown RBP10.8□□□□□ -0.68
TPM1-225ENST00000560679 SEZ6Q53EL9 994 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 PMS2CLQ68D20 193 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 MPZL3Q6UWV2 235 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 DEFB124Q8NES8 71 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 KIFAP3Q92845 792 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 ZBTB45Q96K62 511 aaPredicted RBP10.8□□□□□ -0.68
TPM1-225ENST00000560679 ACAP3Q96P50 834 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 MRPL4Q9BYD3 311 aaKnown RBP10.8□□□□□ -0.68
TPM1-225ENST00000560679 EBF3Q9H4W6 596 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 TASP1Q9H6P5 420 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 TMEM9BQ9NQ34 198 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 GKN1Q9NS71 199 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 ORC3Q9UBD5 711 aaPredicted RBP10.8□□□□□ -0.68
TPM1-225ENST00000560679 KLK13Q9UKR3 277 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 TPCN1Q9ULQ1 816 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 NEUROG3Q9Y4Z2 214 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 ASB3Q9Y575 518 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 ANK1P16157 1881 aa10.8□□□□□ -0.68
TPM1-225ENST00000560679 ASH1LQ9NR48 2969 aaKnown RBP10.79□□□□□ -0.68
TPM1-225ENST00000560679 OR6C75A6NL08 312 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 PPEF2O14830 753 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 PFKFB2O60825 505 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 RHOBTB1O94844 696 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 APBB3O95704 486 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 CAPNS1P04632 268 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 BCKDHBP21953 392 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 LRPAP1P30533 357 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 GUCY2FP51841 1108 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 CDR1P51861 262 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 PEX3P56589 373 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 SPAG1Q07617 926 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 RUNX3Q13761 415 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 ARHGAP15Q53QZ3 475 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 SYT13Q7L8C5 426 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 TMEM150AQ86TG1 271 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 DIS3L2Q8IYB7 885 aaKnown RBP10.79□□□□□ -0.68
TPM1-225ENST00000560679 OR10T2Q8NGX3 314 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 RPLP0P6Q8NHW5 317 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 SLC46A2Q9BY10 475 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 OXCT2Q9BYC2 517 aaPredicted RBP10.79□□□□□ -0.68
TPM1-225ENST00000560679 TM6SF1Q9BZW5 370 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 BHMT2Q9H2M3 363 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 EBF1Q9UH73 591 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 TBX20Q9UMR3 447 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 INVSQ9Y283 1065 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 THADAQ6YHU6 1953 aa10.79□□□□□ -0.68
TPM1-225ENST00000560679 ADAMTS20P59510 1910 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 CCDC169A6NNP5 214 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 FGF19O95750 216 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 CXCL8P10145 99 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 MARCKSP29966 332 aaPredicted RBP10.78□□□□□ -0.68
TPM1-225ENST00000560679 MCM7P33993 719 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 MAPK7Q13164 816 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 MYBPC2Q14324 1141 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 DMC1Q14565 340 aa10.78□□□□□ -0.68
TPM1-225ENST00000560679 NOLC1Q14978 699 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM1-225ENST00000560679 CMTM8Q8IZV2 173 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms