RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 FAM83CQ9BQN1 747 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 SMG9Q9H0W8 520 aaKnown RBP13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 TMEM60Q9H2L4 133 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 TMEM9BQ9NQ34 198 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 HPS4Q9NQG7 708 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 TPCN1Q9ULQ1 816 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 SLC27A5Q9Y2P5 690 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 TIMM13Q9Y5L4 95 aaPredicted RBP13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 ANAPC1Q9H1A4 1944 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 MYOFQ9NZM1 2061 aa13.99□□□□□ -0.17
RABGGTA-213ENST00000560127 PLXND1Q9Y4D7 1925 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 ARHGEF35A5YM69 484 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 K7ERI5 159 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 M0QZQ0 153 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 ABLIM1O14639 778 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 MARCKSP29966 332 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 KRT2P35908 639 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 ALDH1A3P47895 512 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 MCM2P49736 904 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 YWHAHQ04917 246 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 GPR17Q13304 367 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 KIAA1211LQ6NV74 962 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 TTC9BQ8N6N2 239 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 ATAD1Q8NBU5 361 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 POLR3CQ9BUI4 534 aaPredicted RBP13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 TASP1Q9H6P5 420 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 FBRSL1Q9HCM7 1045 aaKnown RBP13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 NEUROG3Q9Y4Z2 214 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 ASB3Q9Y575 518 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 MAST4O15021 2626 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 PLXNB3Q9ULL4 1909 aa13.98□□□□□ -0.17
RABGGTA-213ENST00000560127 URB1O60287 2271 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 GOLGA4Q13439 2230 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 PATE3B3GLJ2 98 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 KHNYNO15037 678 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 HYAL3O43820 417 aaPredicted RBP13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 SOAT2O75908 522 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 CDKL5O76039 1030 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 MCF2P10911 925 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 PROZP22891 400 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 CYP4F8P98187 520 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 RUNX3Q13761 415 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 KARSQ15046 597 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 PTPAQ15257 358 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 ARHGAP15Q53QZ3 475 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 TAS1R3Q7RTX0 852 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 DEFB124Q8NES8 71 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 TARS2Q9BW92 718 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 EBF3Q9H4W6 596 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 IL21Q9HBE4 155 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 THG1LQ9NWX6 298 aaKnown RBP13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 TUBGCP4Q9UGJ1 667 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 EBF1Q9UH73 591 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
RABGGTA-213ENST00000560127 PHLPP2Q6ZVD8 1323 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 MTMR11A4FU01 709 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 OR6C75A6NL08 312 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 CTDNEP1O95476 244 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 APBB3O95704 486 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 FGF19O95750 216 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 RPA1P27694 616 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 GALK1P51570 392 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 SLC10A6Q3KNW5 377 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 PMS2CLQ68D20 193 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 SYT13Q7L8C5 426 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 KIFAP3Q92845 792 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 COL26A1Q96A83 441 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 SLC46A2Q9BY10 475 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 OXCT2Q9BYC2 517 aaPredicted RBP13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 KLK13Q9UKR3 277 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 INVSQ9Y283 1065 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 MSRB2Q9Y3D2 182 aa13.96□□□□□ -0.17
RABGGTA-213ENST00000560127 NAV2Q8IVL1 2488 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 U2AF2P26368 475 aaKnown RBP eCLIP13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 GBP1P32455 592 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 AARSP49588 968 aaKnown RBP eCLIP13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 IRX4P78413 519 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 UAP1L1Q3KQV9 507 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 ITIH5Q86UX2 942 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 EZH1Q92800 747 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 ZBTB45Q96K62 511 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 TMEM134Q9H6X4 195 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 ORC3Q9UBD5 711 aaPredicted RBP13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 CCL26Q9Y258 94 aa13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 HELZP42694 1942 aaKnown RBP13.95□□□□□ -0.18
RABGGTA-213ENST00000560127 KALRNO60229 2985 aa13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 CCDC169A6NNP5 214 aa13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 BTBD18B2RXH4 712 aa13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 LARGE1O95461 756 aa13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 ARSAP15289 507 aa13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 DRD1P21728 446 aa13.94□□□□□ -0.18
RABGGTA-213ENST00000560127 LRPAP1P30533 357 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms