RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 TFDP1Q14186 410 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 FAM110CQ1W6H9 321 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 ODF2Q5BJF6 829 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 DPP9Q86TI2 863 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 WDTC1Q8N5D0 677 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 ARFGAP2Q8N6H7 521 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 TLCD1Q96CP7 247 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 JPH2Q9BR39 696 aaPredicted RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 CDT1Q9H211 546 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 IFT122Q9HBG6 1241 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 POLIQ9UNA4 740 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 TMEM191CA6NGB0 347 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 MYO1CO00159 1063 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 NDUFAB1O14561 156 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 MEFVO15553 781 aaPredicted RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 RIPK2O43353 540 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 INSRRP14616 1297 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 IVDP26440 423 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 MAN1A1P33908 653 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 SSR1P43307 286 aaKnown RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 RAP1GAPP47736 663 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 OGDHQ02218 1023 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 PTK6Q13882 451 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 TRIP13Q15645 432 aaPredicted RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 ATP13A4Q4VNC1 1196 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 PPP1R2P3Q6NXS1 205 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 HOOK3Q86VS8 718 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 HOMEZQ8IX15 550 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 UHMK1Q8TAS1 419 aaKnown RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 AFG1LQ8WV93 481 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 MAIP1Q8WWC4 291 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 EMID1Q96A84 441 aaPredicted RBP11.72□□□□□ -0.53
SPG11-217ENST00000559511 MAML3Q96JK9 1138 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 MCEEQ96PE7 176 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 WHRNQ9P202 907 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 ASIC3Q9UHC3 531 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 IP6K2Q9UHH9 426 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 TRIP11Q15643 1979 aa11.72□□□□□ -0.53
SPG11-217ENST00000559511 GPR25O00155 361 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 TRIM66O15016 1216 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 LSM8O95777 96 aaKnown RBP11.71□□□□□ -0.53
SPG11-217ENST00000559511 TNNC2P02585 160 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 NFICP08651 508 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 RARGP13631 454 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 ADCY2Q08462 1091 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 CALCOCO2Q13137 446 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 SLMAPQ14BN4 828 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 ZNF484Q5JVG2 852 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 RHBDF2Q6PJF5 856 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 PLEKHH3Q7Z736 793 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 CCDC25Q86WR0 208 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 EXD1Q8NHP7 514 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 NPLOC4Q8TAT6 608 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 CCDC114Q96M63 670 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
SPG11-217ENST00000559511 SIX4Q9UIU6 781 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 NEU2Q9Y3R4 380 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 CITO14578 2027 aa11.71□□□□□ -0.53
SPG11-217ENST00000559511 SMIM23A6NLE4 172 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 F8VP50 259 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 PI4K2BG5E9Z4 385 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 EBAG9O00559 213 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 CALB1P05937 261 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 ZNF286BP0CG31 522 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 CDH5P33151 784 aaPredicted RBP11.71□□□□□ -0.54
SPG11-217ENST00000559511 CHKAP35790 457 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 CYP4A22Q5TCH4 519 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 DNAJC24Q6P3W2 148 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 TMEM35BQ8NCS4 154 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 EPS8L3Q8TE67 593 aaKnown RBP11.71□□□□□ -0.54
SPG11-217ENST00000559511 SNF8Q96H20 258 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 ANKRD36BP1Q96IX9 119 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 TINF2Q9BSI4 451 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 C16orf70Q9BSU1 422 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 DDX23Q9BUQ8 820 aaKnown RBP11.71□□□□□ -0.54
SPG11-217ENST00000559511 FAM129AQ9BZQ8 928 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 PCDHGC3Q9UN70 934 aa11.71□□□□□ -0.54
SPG11-217ENST00000559511 TRIP12Q14669 1992 aaPredicted RBP11.71□□□□□ -0.54
SPG11-217ENST00000559511 TLDC2A0PJX2 215 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
SPG11-217ENST00000559511 KRT19P08727 400 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 SMPD1P17405 629 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 VPS41P49754 854 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 ITGA8P53708 1063 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 CCNG2Q16589 344 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 AMHR2Q16671 573 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 TXNRD3NBQ6F5E7 133 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 DENND1BQ6P3S1 775 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 SYDE1Q6ZW31 735 aaPredicted RBP11.7□□□□□ -0.54
SPG11-217ENST00000559511 NLRP14Q86W24 1093 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 C1orf127Q8N9H9 656 aa11.7□□□□□ -0.54
SPG11-217ENST00000559511 ATL2Q8NHH9 583 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms