RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ZNF746Q6NUN9 644 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 IKBIPQ70UQ0 350 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 SLC13A5Q86YT5 568 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 RTL3Q8N8U3 475 aaKnown RBP12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 ALG6Q9Y672 507 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 NCKAP5LQ9HCH0 1330 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 NLRP1Q9C000 1473 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 APOL1O14791 398 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 ADCY6O43306 1168 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 UNC5CO95185 931 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 EPHB2P29323 1055 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 CHRNB3Q05901 458 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 CDO1Q16878 200 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 TPCN2Q8NHX9 752 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 KLHL3Q9UH77 587 aa12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 SEPT9Q9UHD8 586 aaPredicted RBP12.28□□□□□ -0.44
CSPG4P12-201ENST00000558282 CNOT3O75175 753 aaKnown RBP12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 GNA15P30679 374 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 COG2Q14746 738 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 TRIP4Q15650 581 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 ALX1Q15699 326 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 FAM45BPQ6NSW5 357 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 TMEM270Q6UE05 265 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 FAM111AQ96PZ2 611 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 UBA2Q9UBT2 640 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 APEX2Q9UBZ4 518 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 WDR37Q9Y2I8 494 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 EVPLLA8MZ36 301 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 MYO1GB0I1T2 1018 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 ABCC3O15438 1527 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 BAIAP3O94812 1187 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 PLEKHA8P1O95397 391 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 CERKLQ49MI3 558 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 SLC45A4Q5BKX6 768 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 TCAIMQ8N3R3 496 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 OXER1Q8TDS5 423 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 TMEM2Q9UHN6 1383 aa12.27□□□□□ -0.44
CSPG4P12-201ENST00000558282 KRT20P35900 424 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 ATXN3P54252 364 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZNF844Q08AG5 666 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 C6orf10Q5SRN2 563 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 GIPC3Q8TF64 312 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 CHID1Q9BWS9 393 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 RIC8BQ9NVN3 520 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 BTBD3Q9Y2F9 522 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 ERVK-7P63135 1459 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 TYW5A2RUC4 315 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 CENPXA8MT69 81 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 HMGB3O15347 200 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 C21orf2O43822 256 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 ABCB1P08183 1280 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 EXOSC10Q01780 885 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 PDIA5Q14554 519 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZYXQ15942 572 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 RNF43Q68DV7 783 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 PDCD6IPQ8WUM4 868 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 STRBPQ96SI9 672 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 ANO3Q9BYT9 981 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 REXO4Q9GZR2 422 aaKnown RBP12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 LY9Q9HBG7 655 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 WDR35Q9P2L0 1181 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 DMTF1Q9Y222 760 aa12.27□□□□□ -0.45
CSPG4P12-201ENST00000558282 ATP8B3O60423 1300 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 WDR17Q8IZU2 1322 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SNTNA6NMZ2 147 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 TRIM49D1C9J1S8 452 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 VWA5AO00534 786 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 NPTXRO95502 500 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SLC9A1P19634 815 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 FASP25445 335 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 MCL1Q07820 350 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 NR1D2Q14995 579 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 ARHGAP17Q68EM7 881 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 NET1Q7Z628 596 aaPredicted RBP12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 KYQ8NBH2 561 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 TADA1Q96BN2 335 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SENP7Q9BQF6 1050 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 GRIP2Q9C0E4 1043 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 TASP1Q9H6P5 420 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 IMPAD1Q9NX62 359 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SORCS3Q9UPU3 1222 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 FESP07332 822 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 COMTP21964 271 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 AP3M2P53677 418 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 AQP5P55064 265 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 MAPRE1Q15691 268 aaKnown RBP12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SUN5Q8TC36 379 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 SKA1Q96BD8 255 aa12.26□□□□□ -0.45
CSPG4P12-201ENST00000558282 MSTO1Q9BUK6 570 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms