RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TMEM86AQ8N2M4 240 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 PDCL2Q8N4E4 241 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 TOP6BLQ8N6T0 577 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 TRIML1Q8N9V2 468 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 OR6B3Q8NGW1 331 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 SPATA20Q8TB22 786 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 PARD3BQ8TEW8 1205 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 ACSF2Q96CM8 615 aaPredicted RBP9.64□□□□□ -0.87
SPG11-207ENST00000558138 PRKD2Q9BZL6 878 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 POMKQ9H5K3 350 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.64□□□□□ -0.87
SPG11-207ENST00000558138 DDX43Q9NXZ2 648 aaKnown RBP9.64□□□□□ -0.87
SPG11-207ENST00000558138 ABI2Q9NYB9 513 aaPredicted RBP9.64□□□□□ -0.87
SPG11-207ENST00000558138 AFF4Q9UHB7 1163 aaKnown RBP9.64□□□□□ -0.87
SPG11-207ENST00000558138 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 SIX4Q9UIU6 781 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 SCN1AP35498 2009 aa9.64□□□□□ -0.87
SPG11-207ENST00000558138 CLUHO75153 1309 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 MAPK13O15264 365 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 SLC16A3O15427 465 aaKnown RBP9.63□□□□□ -0.87
SPG11-207ENST00000558138 MBD3O95983 291 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 C1RP00736 705 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 CYP11A1P05108 521 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ATF2P15336 505 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 FSHRP23945 695 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ACAT1P24752 427 aaKnown RBP9.63□□□□□ -0.87
SPG11-207ENST00000558138 PCSK1P29120 753 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ATICP31939 592 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 GCLMP48507 274 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 LHX1P48742 406 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 EPHB3P54753 998 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ZP2Q05996 745 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 TWF1Q12792 350 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 MRPL58Q14197 206 aaKnown RBP9.63□□□□□ -0.87
SPG11-207ENST00000558138 VEPH1Q14D04 833 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 UVSSAQ2YD98 709 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 COBLL1Q53SF7 1204 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ZNF667Q5HYK9 610 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 CENPPQ6IPU0 288 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 LILRA6Q6PI73 481 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 OTOP3Q7RTS5 596 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 GRASPQ7Z6J2 395 aaPredicted RBP9.63□□□□□ -0.87
SPG11-207ENST00000558138 CMASQ8NFW8 434 aaPredicted RBP9.63□□□□□ -0.87
SPG11-207ENST00000558138 SUSD6Q92537 303 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ZNF516Q92618 1163 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ZNF512Q96ME7 567 aaPredicted RBP9.63□□□□□ -0.87
SPG11-207ENST00000558138 TMEM209Q96SK2 561 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 MKNK1Q9BUB5 465 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 LMBRD1Q9NUN5 540 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 ARMCX3Q9UH62 379 aaPredicted RBP9.63□□□□□ -0.87
SPG11-207ENST00000558138 L1RE1Q9UN81 338 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 SLC27A5Q9Y2P5 690 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 INSL5Q9Y5Q6 135 aa9.63□□□□□ -0.87
SPG11-207ENST00000558138 MTCL1Q9Y4B5 1905 aaKnown RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 TSC2P49815 1807 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 MTMR11A4FU01 709 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 A8MXQ7 604 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 IKBKBO14920 756 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 CST3P01034 146 aaPredicted RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 HLA-DRAP01903 254 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 PDGFRBP09619 1106 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 HOXA9P31269 272 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 MXI1P50539 228 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 PMS1P54277 932 aaKnown RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 PSMC1P62191 440 aaKnown RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 CYP27A1Q02318 531 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 CETN1Q12798 172 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 DUSP4Q13115 394 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 GPR17Q13304 367 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 SGSM1Q2NKQ1 1148 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 PABPC1LQ4VXU2 614 aaKnown RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 ZCWPW2Q504Y3 356 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 WDR44Q5JSH3 913 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 CYP4A22Q5TCH4 519 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 CLEC17AQ6ZS10 378 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 PDZD4Q76G19 769 aaPredicted RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 SPATA2LQ8IUW3 424 aaPredicted RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 OR10T2Q8NGX3 314 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 PLEKHO2Q8TD55 490 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 GCNAQ96QF7 691 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 CORO1BQ9BR76 489 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 DNAI2Q9GZS0 605 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 ZCWPW1Q9H0M4 648 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 METTL14Q9HCE5 456 aaKnown RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 TMEM8AQ9HCN3 771 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 ASAH2Q9NR71 780 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 GDAP2Q9NXN4 497 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 MAFFQ9ULX9 164 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 MRPS23Q9Y3D9 190 aaKnown RBP9.62□□□□□ -0.87
SPG11-207ENST00000558138 YIPF1Q9Y548 306 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 PCDHB5Q9Y5E4 795 aa9.62□□□□□ -0.87
SPG11-207ENST00000558138 C2CD4DB7Z1M9 353 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 PPP1R3GB7ZBB8 358 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 TBC1D4O60343 1298 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SOAT2O75908 522 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms