RNA–Protein interactions for RNA: ENST00000557557.1

PSMC6-216, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 2,939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-216ENST00000557557 FBXL16Q8N461 479 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 PSPC1Q8WXF1 523 aaKnown RBP7.22□□□□□ -1.25
PSMC6-216ENST00000557557 RMDN1Q96DB5 314 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 FEM1CQ96JP0 617 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 CLPTM1LQ96KA5 538 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 CNBD2Q96M20 576 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 UNKQ9C0B0 810 aaKnown RBP7.22□□□□□ -1.25
PSMC6-216ENST00000557557 STMN4Q9H169 189 aaPredicted RBP7.22□□□□□ -1.25
PSMC6-216ENST00000557557 RIC8AQ9NPQ8 531 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 MCM9Q9NXL9 1143 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 COQ3Q9NZJ6 369 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 PHTF1Q9UMS5 762 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.22□□□□□ -1.25
PSMC6-216ENST00000557557 STARD13Q9Y3M8 1113 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 TSPOAP1O95153 1857 aa7.22□□□□□ -1.25
PSMC6-216ENST00000557557 FAM237AA0A1B0GTK4 181 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 TYW5A2RUC4 315 aaKnown RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 SMCO2A6NFE2 343 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 hCG_2039718K7EN88 272 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 BUD23O43709 281 aaKnown RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 SPAG7O75391 227 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 ICAM2P13598 275 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 KRT10P13645 584 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 KRT5P13647 590 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 GFAPP14136 432 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 TAC1P20366 129 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 SLC1A4P43007 532 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 GNG2P59768 71 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 SMARCB1Q12824 385 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 IKQ13123 557 aaPredicted RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 HNRNPDQ14103 355 aaKnown RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 NPTX1Q15818 432 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 HERC4Q5GLZ8 1057 aaPredicted RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 VSTM1Q6UX27 236 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 UNC5DQ6UXZ4 953 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 SLC30A10Q6XR72 485 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 RIPOR1Q6ZS17 1223 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 BARGINQ6ZT62 677 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 NET1Q7Z628 596 aaPredicted RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 CLNKQ7Z7G1 428 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 METTL3Q86U44 580 aaKnown RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 EDC3Q96F86 508 aaKnown RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 TSNARE1Q96NA8 513 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 CITED4Q96RK1 184 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 DNAJC18Q9H819 358 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 HPS4Q9NQG7 708 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 ANLNQ9NQW6 1124 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 ARL8BQ9NVJ2 186 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 TAS2R1Q9NYW7 299 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 ARHGAP20Q9P2F6 1191 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 DCTN4Q9UJW0 460 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 SLC4A4Q9Y6R1 1079 aa7.21□□□□□ -1.25
PSMC6-216ENST00000557557 ZC3H13Q5T200 1668 aaKnown RBP7.21□□□□□ -1.25
PSMC6-216ENST00000557557 CENPBD1B2RD01 187 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 ATP6V1G2-DDX39BF2Z307 99 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 MEN1O00255 615 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 RNASEH2AO75792 299 aaKnown RBP7.21□□□□□ -1.26
PSMC6-216ENST00000557557 KLHL2O95198 593 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 ATF4P18848 351 aaPredicted RBP7.21□□□□□ -1.26
PSMC6-216ENST00000557557 NCKAP1LP55160 1127 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.26
PSMC6-216ENST00000557557 MRPL28Q13084 256 aaKnown RBP7.21□□□□□ -1.26
PSMC6-216ENST00000557557 MTMR2Q13614 643 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 PON2Q15165 354 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 TRIP10Q15642 601 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 ZYXQ15942 572 aaKnown RBP7.21□□□□□ -1.26
PSMC6-216ENST00000557557 MOGQ16653 247 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 SLC9C1Q4G0N8 1177 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 PPP6R3Q5H9R7 873 aaPredicted RBP7.21□□□□□ -1.26
PSMC6-216ENST00000557557 CLVS2Q5SYC1 327 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 C1orf146Q5VVC0 180 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 FAM205BPQ63HN1 556 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 PLEKHA7Q6IQ23 1121 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 PPP4R4Q6NUP7 873 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 CCDC25Q86WR0 208 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 CCDC28AQ8IWP9 274 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 SSH3Q8TE77 659 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 GRAMD1AQ96CP6 724 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 BIRC8Q96P09 236 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 MRPS26Q9BYN8 205 aaKnown RBP7.21□□□□□ -1.26
PSMC6-216ENST00000557557 VPS33BQ9H267 617 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 C10orf88Q9H8K7 445 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 TRIM39Q9HCM9 518 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 DAPK2Q9UIK4 370 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 STXBP5LQ9Y2K9 1186 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 PREX1Q8TCU6 1659 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 QRICH2Q9H0J4 1663 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 MYH4Q9Y623 1939 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 TMEM131LA2VDJ0 1609 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 NCKAP5LQ9HCH0 1330 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 A0A1B0GTW7 788 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 TRIM49BA6NDI0 452 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 CAPN8A6NHC0 703 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 NMT2O60551 498 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 SULT1C4O75897 302 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 SEMA3DO95025 777 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 BMP10O95393 424 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 ESRRBO95718 433 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 GSTM1P09488 218 aa7.21□□□□□ -1.26
PSMC6-216ENST00000557557 CCDC130P13994 396 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms