RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 MAN1A1P33908 653 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 ORC1Q13415 861 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 PPP1R7Q15435 360 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 SLC10A6Q3KNW5 377 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 WDR72Q3MJ13 1102 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 MARCH8Q5T0T0 291 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 CYP4A22Q5TCH4 519 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 GPR142Q7Z601 462 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 ZNF467Q7Z7K2 595 aaPredicted RBP25.75■■□□□ 1.71
TMEM260-207ENST00000555497 MCEEQ96PE7 176 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 FAM118BQ9BPY3 351 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 PABPC3Q9H361 631 aaKnown RBP25.75■■□□□ 1.71
TMEM260-207ENST00000555497 RABEP2Q9H5N1 569 aa25.75■■□□□ 1.71
TMEM260-207ENST00000555497 TUT1Q9H6E5 874 aaKnown RBP25.75■■□□□ 1.71
TMEM260-207ENST00000555497 PPFIA4O75335 1185 aa25.74■■□□□ 1.71
TMEM260-207ENST00000555497 ITGB3P05106 788 aa25.74■■□□□ 1.71
TMEM260-207ENST00000555497 PPP1R15BQ5SWA1 713 aa25.74■■□□□ 1.71
TMEM260-207ENST00000555497 SEMA4AQ9H3S1 761 aa25.74■■□□□ 1.71
TMEM260-207ENST00000555497 TJP2Q9UDY2 1190 aa25.74■■□□□ 1.71
TMEM260-207ENST00000555497 CYTH4Q9UIA0 394 aa25.74■■□□□ 1.71
TMEM260-207ENST00000555497 F8VP50 259 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 GUCY1A3Q02108 690 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 ZNF667Q5HYK9 610 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 ANKRD23Q86SG2 305 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 OSBPL8Q9BZF1 889 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 ZNF518BQ9C0D4 1074 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 SMYD3Q9H7B4 428 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 BCCIPQ9P287 314 aaKnown RBP eCLIP25.73■■□□□ 1.71
TMEM260-207ENST00000555497 PARP2Q9UGN5 583 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 DCDC2CA8MYV0 355 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 ADCY6O43306 1168 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 IVLP07476 585 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 EIF4BP23588 611 aaKnown RBP25.73■■□□□ 1.71
TMEM260-207ENST00000555497 GBP1P32455 592 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 GCLCP48506 637 aaPredicted RBP25.73■■□□□ 1.71
TMEM260-207ENST00000555497 RAD23BP54727 409 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 DNAJC24Q6P3W2 148 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 RUFY4Q6ZNE9 571 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 DPP9Q86TI2 863 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 EXD1Q8NHP7 514 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 MAIP1Q8WWC4 291 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 MAML3Q96JK9 1138 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 TWNKQ96RR1 684 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 HMGXB4Q9UGU5 601 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 COL1A2P08123 1366 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 KAT6AQ92794 2004 aa25.73■■□□□ 1.71
TMEM260-207ENST00000555497 PI4K2BG5E9Z4 385 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 IVDP26440 423 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 TMOD1P28289 359 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 HPDP32754 393 aaPredicted RBP25.72■■□□□ 1.71
TMEM260-207ENST00000555497 LACTBP83111 547 aaPredicted RBP25.72■■□□□ 1.71
TMEM260-207ENST00000555497 ADCY2Q08462 1091 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 SKIDA1Q1XH10 827 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 KRT71Q3SY84 523 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 ERICH1Q86X53 443 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 PTPN18Q99952 460 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 UNCXA6NJT0 531 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 CD19P15391 556 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 PPARDQ03181 441 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 GRB14Q14449 540 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 TRIP13Q15645 432 aaPredicted RBP25.72■■□□□ 1.71
TMEM260-207ENST00000555497 TXNRD3NBQ6F5E7 133 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 NLRP7Q8WX94 980 aa25.72■■□□□ 1.71
TMEM260-207ENST00000555497 MTRF1LQ9UGC7 380 aaKnown RBP25.72■■□□□ 1.71
TMEM260-207ENST00000555497 NUDT17P0C025 328 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 TNFAIP2Q03169 654 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 SLC29A2Q14542 456 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 PTPN20Q4JDL3 420 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 AGBL2Q5U5Z8 902 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 ILDR2Q71H61 639 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 NOVA2Q9UNW9 492 aaKnown RBP25.71■■□□□ 1.71
TMEM260-207ENST00000555497 TSPAN1O60635 241 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 MMP3P08254 477 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 FGFR4P22455 802 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 GRIK4Q16099 956 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 KIAA0319LQ8IZA0 1049 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 NPLOC4Q8TAT6 608 aa25.71■■□□□ 1.71
TMEM260-207ENST00000555497 YWHAEP62258 255 aaKnown RBP25.7■■□□□ 1.7
TMEM260-207ENST00000555497 IFFO1Q0D2I5 559 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 PTK6Q13882 451 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 DUSP28Q4G0W2 176 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 DCUN1D2Q6PH85 259 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 SLC4A11Q8NBS3 891 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 ELOVL4Q9GZR5 314 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 AAASQ9NRG9 546 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 NEU2Q9Y3R4 380 aa25.7■■□□□ 1.7
TMEM260-207ENST00000555497 ZEB2O60315 1214 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 KRT10P13645 584 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 NFX1Q12986 1120 aaKnown RBP25.69■■□□□ 1.7
TMEM260-207ENST00000555497 PPP1R13LQ8WUF5 828 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 WHRNQ9P202 907 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 ASIC3Q9UHC3 531 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 CAND2O75155 1236 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 EIF3BP55884 814 aaKnown RBP25.69■■□□□ 1.7
TMEM260-207ENST00000555497 ACVR2BQ13705 512 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 RHBDF2Q6PJF5 856 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 C3orf20Q8ND61 904 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 ATL2Q8NHH9 583 aa25.69■■□□□ 1.7
TMEM260-207ENST00000555497 ACSF2Q96CM8 615 aaPredicted RBP25.69■■□□□ 1.7
TMEM260-207ENST00000555497 LHX5Q9H2C1 402 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms