RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 DCAF6Q58WW2 860 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 IZUMO3Q5VZ72 239 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 TLK2Q86UE8 772 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 STK38LQ9Y2H1 464 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 CLTAP09496 248 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 CLNS1AP54105 237 aaKnown RBP12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 MTMR3Q13615 1198 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 GPR142Q7Z601 462 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 EGFL6Q8IUX8 553 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 HACE1Q8IYU2 909 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 SCINQ9Y6U3 715 aa12.9□□□□□ -0.34
ARHGEF40-206ENST00000555232 PMS2P54278 862 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 NT5DC3Q86UY8 548 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 FAM131BQ86XD5 332 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 USP33Q8TEY7 942 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 MINDY3Q9H8M7 445 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 CHST7Q9NS84 486 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 PRMT7Q9NVM4 692 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 FOXO6A8MYZ6 492 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 ETS1P14921 441 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 MXRA7P84157 204 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 PDIA2Q13087 525 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 GOLGA7BQ2TAP0 167 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 NDRG1Q92597 394 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 G3BP2Q9UN86 482 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 MYH7P12883 1935 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 APRTP07741 180 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 GARTP22102 1010 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 NDST1P52848 882 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 PYROXD1Q8WU10 500 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 FAF2Q96CS3 445 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 TRIM11Q96F44 468 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 ZSWIM1Q9BR11 485 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 TINF2Q9BSI4 451 aa12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.89□□□□□ -0.35
ARHGEF40-206ENST00000555232 ACO1P21399 889 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 ELF1P32519 619 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 RBP5P82980 135 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 FMO1Q01740 532 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 IL31Q6EBC2 164 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 KIAA1841Q6NSI8 718 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 C4orf33Q8N1A6 199 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 FAM71DQ8N9W8 422 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 MTMR14Q8NCE2 650 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 GTF3C4Q9UKN8 822 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 COG5Q9UP83 839 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 URB1O60287 2271 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 SPDYE5A6NIY4 337 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 TJP3O95049 919 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 C15orf59Q2T9L4 293 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 MICALCLQ6ZW33 695 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 SLC13A5Q86YT5 568 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 MAP7D3Q8IWC1 876 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 P3H4Q92791 437 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 C18orf25Q96B23 403 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 CALR3Q96L12 384 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 ZFP42Q96MM3 310 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 CDT1Q9H211 546 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 VPS33BQ9H267 617 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 CNTRLQ7Z7A1 2325 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 GOLGA8KD6RF30 607 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 O00370 1275 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 SURF1Q15526 300 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 FAM133BQ5BKY9 247 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 FEZF2Q8TBJ5 459 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 GRK7Q8WTQ7 553 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 GPR20Q99678 358 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 ELAC2Q9BQ52 826 aaKnown RBP12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 NT5C1AQ9BXI3 368 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 WNT8AQ9H1J5 351 aa12.88□□□□□ -0.35
ARHGEF40-206ENST00000555232 MYH1P12882 1939 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 CALB1P05937 261 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 TGFB3P10600 412 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 ARF4P18085 180 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 CA4P22748 312 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 SESN2P58004 480 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 AP1B1Q10567 949 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 PGLYRP2Q96PD5 576 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 TIPINQ9BVW5 301 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 NXF3Q9H4D5 531 aaKnown RBP12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 C17orf75Q9HAS0 396 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 ERVK-5Q9HDB9 667 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 RARAP10276 462 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 FLT3P36888 993 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 ARL4AP40617 200 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 IRAK1P51617 712 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 AMPD2Q01433 879 aa12.87□□□□□ -0.35
ARHGEF40-206ENST00000555232 NUGGCQ68CJ6 796 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms