RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 TRIM43BA6NCK2 446 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 IL13P35225 146 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 DUOXA2Q1HG44 320 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 TLK2Q86UE8 772 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 DYRK1BQ9Y463 629 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 MAST1Q9Y2H9 1570 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ITGA4P13612 1032 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 AKR1B1P15121 316 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CASP1P29466 404 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CASP8Q14790 479 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 PARP9Q8IXQ6 854 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 BLOC1S5Q8TDH9 187 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CPA5Q8WXQ8 436 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 SEPT3Q9UH03 358 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 RNF112Q9ULX5 631 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ENDOD1O94919 500 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 YY1P25490 414 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 STIP1P31948 543 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 MRPS35P82673 323 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 HIC1Q14526 733 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 SLC39A14Q15043 492 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 MTSS1LQ765P7 747 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 AIFM3Q96NN9 605 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 ZSWIM6Q9HCJ5 1215 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 TXNP10599 105 aaKnown RBP7.18□□□□□ -1.26
SYNE2-216ENST00000555002 CCNE1P24864 410 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 GRK4P32298 578 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 KRT76Q01546 638 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 DGKKQ5KSL6 1271 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 SYNE4Q8N205 404 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 MOSPD2Q8NHP6 518 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 RAD54LQ92698 747 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 KLHL1Q9NR64 748 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 EMSYQ7Z589 1322 aa7.18□□□□□ -1.26
SYNE2-216ENST00000555002 NMT2O60551 498 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 USP1O94782 785 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MAPKAPK2P49137 400 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 HMGCS2P54868 508 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 SPP2Q13103 211 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CLEC16AQ2KHT3 1053 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CYP4A22Q5TCH4 519 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF512BQ96KM6 892 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MYLK2Q9H1R3 596 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 TDRD3Q9H7E2 651 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CEP72Q9P209 647 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MYH9P35579 1960 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ANKRD65E5RJM6 399 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MFAP3LO75121 409 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 KRT33AO76009 404 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PDE8BO95263 885 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MTM1Q13496 603 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 LAMB3Q13751 1172 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 VSTM4Q8IW00 320 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 B3GALNT2Q8NCR0 500 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 XPO7Q9UIA9 1087 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 TMCC3Q9ULS5 477 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 GRIN2AQ12879 1464 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PPP6R2O75170 966 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CACHD1Q5VU97 1274 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 DOK6Q6PKX4 331 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CYFIP2Q96F07 1278 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 MASTLQ96GX5 879 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 AAASQ9NRG9 546 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 TRMT6Q9UJA5 497 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 DIS3Q9Y2L1 958 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CCDC22O60826 627 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 STARD3Q14849 445 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 DNAJC1Q96KC8 554 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CAMKK2Q96RR4 588 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 RNF14Q9UBS8 474 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CYP27B1O15528 508 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 NPTXRO95502 500 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CYP2B6P20813 491 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 KYAT1Q16773 422 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PROSER3Q2NL68 480 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 SMTNL2Q2TAL5 461 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ZNF544Q6NX49 715 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 GPD1LQ8N335 351 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 WDR36Q8NI36 951 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 SGF29Q96ES7 293 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PRMT1Q99873 361 aaKnown RBP7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ANAPC2Q9UJX6 822 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 SNX9Q9Y5X1 595 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ICE1Q9Y2F5 2266 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 CROCCQ5TZA2 2017 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 ASB14A6NK59 587 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 HLA-DQA2P01906 255 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PSMC3P17980 439 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 KLC1Q07866 573 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 TGM3Q08188 693 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 STX3Q13277 289 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 GAS2L3Q86XJ1 694 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 GLMNQ92990 594 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 WNT8AQ9H1J5 351 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PARVAQ9NVD7 372 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 KIF24Q5T7B8 1368 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PODXLO00592 558 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 PMPCBO75439 489 aa7.17□□□□□ -1.26
SYNE2-216ENST00000555002 THPOP40225 353 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms