RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	PQLC1	Q8N2U9	271 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	RNF169	Q8NCN4	708 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	SLC35B2	Q8TB61	432 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	PDCD2L	Q9BRP1	358 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	KRTAP4-11	Q9BYQ6	195 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	ASPSCR1	Q9BZE9	553 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	BCO1	Q9HAY6	547 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	SIK3	Q9Y2K2	1263 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	USP16	Q9Y5T5	823 aa		6.57	□□□□□ -1.36
PSMC6-208	ENST00000554956	TNKS	O95271	1327 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	GOLGA6L6	A8MZA4	724 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	CAMTA2	O94983	1202 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	PRKAR2B	P31323	418 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	SLC6A9	P48067	706 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	PER3	P56645	1201 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	MGAT2	Q10469	447 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	LSM12	Q3MHD2	195 aa	Known RBP	6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	PRR5L	Q6MZQ0	368 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	PDZD4	Q76G19	769 aa	Predicted RBP	6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	NRG4	Q8WWG1	115 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	STON2	Q8WXE9	905 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	ZNF703	Q9H7S9	590 aa	Predicted RBP	6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	CEMIP	Q8WUJ3	1361 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	HEG1	Q9ULI3	1381 aa		6.56	□□□□□ -1.36
PSMC6-208	ENST00000554956	SHTN1	A0MZ66	631 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	GLTPD2	A6NH11	291 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	PRR5-ARHGAP8	B1AHC4	643 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	LEFTY2	O00292	366 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	NDUFS2	O75306	463 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	STARD3NL	O95772	234 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	FPR1	P21462	350 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	APOBEC3A	P31941	199 aa	Predicted RBP	6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	FLT3LG	P49771	235 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	DCTN1	Q14203	1278 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	PTPN21	Q16825	1174 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	NAIF1	Q69YI7	327 aa	Predicted RBP	6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	MCM10	Q7L590	875 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	ZNF572	Q7Z3I7	529 aa	Predicted RBP	6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	SYT12	Q8IV01	421 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	TTC5	Q8N0Z6	440 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	RAB24	Q969Q5	203 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	TEKT5	Q96M29	485 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	PARPBP	Q9NWS1	579 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	SORCS3	Q9UPU3	1222 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	ATRNL1	Q5VV63	1379 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	NPC1L1	Q9UHC9	1359 aa		6.55	□□□□□ -1.36
PSMC6-208	ENST00000554956	CXorf49	A8MYA2	514 aa	Predicted RBP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956		B5MCH6	92 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956		H0YIN7	160 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	ALOX15	P16050	662 aa	Predicted RBP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	IL6ST	P40189	918 aa	Predicted RBP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	TEF	Q10587	303 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	FSTL1	Q12841	308 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	BRDT	Q58F21	947 aa	Predicted RBP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	RABL3	Q5HYI8	236 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	FNDC7	Q5VTL7	733 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	AFMID	Q63HM1	303 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	FAM180A	Q6UWF9	173 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	OLFM4	Q6UX06	510 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	OR10H5	Q8NGA6	315 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	BRIP1	Q9BX63	1249 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	KRTAP4-2	Q9BYR5	136 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	SENP6	Q9GZR1	1112 aa	Predicted RBP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	SLC2A4RG	Q9NR83	387 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	LANCL2	Q9NS86	450 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	HOMER2	Q9NSB8	354 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	DDX56	Q9NY93	547 aa	Known RBP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	MIS18A	Q9NYP9	233 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	AJAP1	Q9UKB5	411 aa	Predicted RBP	6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	INTU	Q9ULD6	942 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	SCN11A	Q9UI33	1791 aa		6.54	□□□□□ -1.36
PSMC6-208	ENST00000554956	BRCA1	P38398	1863 aa	Known RBP	6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	KLHL33	A6NCF5	533 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	TBKBP1	A7MCY6	615 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	FSHB	P01225	129 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	SRGN	P10124	158 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	VEGFA	P15692	232 aa	Predicted RBP	6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	PCSK1	P29120	753 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	PPP2R1A	P30153	589 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	GUCY1A2	P33402	732 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	ALDH1A3	P47895	512 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	RAP2B	P61225	183 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	TUBA3C	Q13748	450 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	ODF1	Q14990	250 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	FAM47A	Q5JRC9	791 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	TUBA3E	Q6PEY2	450 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	C16orf71	Q8IYS4	520 aa	Predicted RBP	6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	ZGPAT	Q8N5A5	531 aa	Known RBP	6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	CPT1C	Q8TCG5	803 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	CCHCR1	Q8TD31	782 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	TFAP2C	Q92754	450 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	NDC1	Q9BTX1	674 aa		6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	ZNF768	Q9H5H4	540 aa	Known RBP	6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	EIF2B4	Q9UI10	523 aa	Known RBP	6.53	□□□□□ -1.36
PSMC6-208	ENST00000554956	HS3ST3A1	Q9Y663	406 aa		6.53	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms