RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 PATJQ8NI35 1801 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 DNALI1O14645 258 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 SNX3O60493 162 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 IQCF3P0C7M6 154 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 LMBRD2Q68DH5 695 aaPredicted RBP13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 ASRGL1Q7L266 308 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 BBOF1Q8ND07 529 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 PICK1Q9NRD5 415 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 TRIP11Q15643 1979 aa13.36□□□□□ -0.27
PPP4R3A-206ENST00000554943 RBM47A0AV96 593 aaKnown RBP13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 CREB1P16220 341 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 SCTRP47872 440 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 MBTD1Q05BQ5 628 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 TXNRD3NBQ6F5E7 133 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 SH2D5Q6ZV89 423 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 MSTO1Q9BUK6 570 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 CCT8L1PA6NM43 557 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 K7ERI5 159 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 LIG3P49916 1009 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 CCDC15Q0P6D6 951 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 VGLL4Q14135 290 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 CELF3Q5SZQ8 465 aaKnown RBP13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 WLSQ5T9L3 541 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 LRRC34Q8IZ02 419 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 GPC2Q8N158 579 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 USP6NLQ92738 828 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 STMN4Q9H169 189 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 OGTO15294 1046 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 ALOX15BO15296 676 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 CALB1P05937 261 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 STRN3Q13033 797 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 CCHCR1Q8TD31 782 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 PCNTO95613 3336 aa13.35□□□□□ -0.27
PPP4R3A-206ENST00000554943 RGS16O15492 202 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 USP8P40818 1118 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 RPL34P49207 117 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 NEDD9Q14511 834 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 TMEM270Q6UE05 265 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 SPOCD1Q6ZMY3 1216 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 PRPF31Q8WWY3 499 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 PRCCQ92733 491 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 NIF3L1Q9GZT8 377 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 SDCBP2Q9H190 292 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 IFT122Q9HBG6 1241 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 SIGLEC16A6NMB1 481 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 TYROBPO43914 113 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 KRT5P13647 590 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 MGAT5Q09328 741 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 SGSM1Q2NKQ1 1148 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 SPDYAQ5MJ70 313 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 TRMT1LQ7Z2T5 733 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 VSIG1Q86XK7 387 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 FAM167AQ96KS9 214 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 PRMT1Q99873 361 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 UBN1Q9NPG3 1134 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 CISHQ9NSE2 258 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 UNCXA6NJT0 531 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 ASMTLO95671 621 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 INCA1Q0VD86 236 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 PIGHQ14442 188 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 MXD4Q14582 209 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 LIN9Q5TKA1 542 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 GKAP1Q5VSY0 366 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 FBXW10Q5XX13 1052 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 DEFB132Q7Z7B7 95 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 CCDC89Q8N998 374 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 NAT8LQ8N9F0 302 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 RTP4Q96DX8 246 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 RBM41Q96IZ5 413 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 MRPL4Q9BYD3 311 aaKnown RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 FHDC1Q9C0D6 1143 aaPredicted RBP13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 SPATC1LQ9H0A9 340 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 TNFSF13BQ9Y275 285 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 TRPM7Q96QT4 1865 aa13.34□□□□□ -0.27
PPP4R3A-206ENST00000554943 ZNF638Q14966 1978 aaKnown RBP13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 TLR3O15455 904 aaKnown RBP13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 RAD23BP54727 409 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 IFT88Q13099 833 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 RIPK1Q13546 671 aa13.33□□□□□ -0.28
PPP4R3A-206ENST00000554943 STAT4Q14765 748 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms