RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 NEK11Q8NG66 645 aa17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 LNX1Q8TBB1 728 aaPredicted RBP17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 KBTBD7Q8WVZ9 684 aa17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 PCMTD1Q96MG8 357 aaPredicted RBP17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 TCF25Q9BQ70 676 aa17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 SMYD3Q9H7B4 428 aa17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 UBE2TQ9NPD8 197 aaPredicted RBP17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 FNIP2Q9P278 1114 aa17.58■□□□□ 0.41
SPTLC2-203ENST00000554901 CHD7Q9P2D1 2997 aa17.58■□□□□ 0.4
SPTLC2-203ENST00000554901 FSD2A1L4K1 749 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 GOLGA6L3A6NEY3 463 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 OR6C75A6NL08 312 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 TBC1D4O60343 1298 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 LILRB3O75022 631 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 CAMK1Q14012 370 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 PTPN14Q15678 1187 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 FIGNQ5HY92 759 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 SCARA5Q6ZMJ2 495 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 ARHGEF19Q8IW93 802 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 MRPL43Q8N983 215 aaKnown RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 RIN2Q8WYP3 895 aaPredicted RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 ACBD6Q9BR61 282 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 NUP58Q9BVL2 599 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 EDEM3Q9BZQ6 932 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 TTYH1Q9H313 450 aaPredicted RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 SNX25Q9H3E2 840 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 RXFP1Q9HBX9 757 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.57■□□□□ 0.48e-16■■■■■ 310.5
SPTLC2-203ENST00000554901 ENTPD7Q9NQZ7 604 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 FAM207AQ9NSI2 230 aaPredicted RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 MTRRQ9UBK8 725 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 BARX2Q9UMQ3 279 aaPredicted RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 TIMM13Q9Y5L4 95 aaPredicted RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 ITIH6Q6UXX5 1313 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 PLXNA4Q9HCM2 1894 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 EPOPA6NHQ4 379 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 LPXNO60711 386 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 C1RP00736 705 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 WEE2P0C1S8 567 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 TRIM21P19474 475 aaKnown RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 DNAJB1P25685 340 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 GNL1P36915 607 aaPredicted RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 ERVFC1P60507 584 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 PSMD5Q16401 504 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 RRAGAQ7L523 313 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 UBR7Q8N806 425 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 ELMO3Q96BJ8 720 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 MRPL38Q96DV4 380 aaKnown RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 MRFAP1L1Q96HT8 127 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 KREMEN1Q96MU8 473 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 MRPL45Q9BRJ2 306 aaKnown RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 NAA15Q9BXJ9 866 aaKnown RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 SDCBP2Q9H190 292 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 GANQ9H2C0 597 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 CISHQ9NSE2 258 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 DDX43Q9NXZ2 648 aaKnown RBP17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 DNAJC12Q9UKB3 198 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 STXBP5LQ9Y2K9 1186 aa17.57■□□□□ 0.4
SPTLC2-203ENST00000554901 CILPO75339 1184 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 NOL4O94818 638 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 CXCL14O95715 111 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 POU3F3P20264 500 aaPredicted RBP17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 CDH8P55286 799 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 CTXN3Q4LDR2 81 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 SLC8B1Q6J4K2 584 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 OR6B3Q8NGW1 331 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 GDPD5Q8WTR4 605 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 TNIP3Q96KP6 325 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 B3GALT6Q96L58 329 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 ARID3AQ99856 593 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 EMILIN2Q9BXX0 1053 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 CEP72Q9P209 647 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 CDH9Q9ULB4 789 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 CNTN6Q9UQ52 1028 aa17.56■□□□□ 0.4
SPTLC2-203ENST00000554901 VWA8A3KMH1 1905 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 A8MXQ7 604 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 AP5Z1O43299 807 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 ACO1P21399 889 aaKnown RBP17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 RAP1GAPP47736 663 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 KLK7P49862 253 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 SMARCB1Q12824 385 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 SPECC1LQ69YQ0 1117 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 FMNL3Q8IVF7 1028 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 MICAL1Q8TDZ2 1067 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 SHC3Q92529 594 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 PPP2R3CQ969Q6 453 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 NT5C1AQ9BXI3 368 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 STK33Q9BYT3 514 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 GRPEL1Q9HAV7 217 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 MYO6Q9UM54 1294 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.55■□□□□ 0.49e-8■□□□□ 9.8
SPTLC2-203ENST00000554901 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
SPTLC2-203ENST00000554901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 C2orf71A6NGG8 1288 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 ADH1AP07327 375 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 NDUFV1P49821 464 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 ZNF75DP51815 510 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 NDST1P52848 882 aa17.54■□□□□ 0.4
SPTLC2-203ENST00000554901 POLR2FP61218 127 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms