RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 TMC5Q6UXY8 1006 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 RPTNQ6XPR3 784 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 RNF207Q6ZRF8 634 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 TMC6Q7Z403 805 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-226ENST00000554350 PPFIBP1Q86W92 1011 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 RPAP2Q8IXW5 612 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-226ENST00000554350 COLGALT1Q8NBJ5 622 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 TP53I13Q8NBR0 393 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-226ENST00000554350 ZBTB44Q8NCP5 570 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 FEZF2Q8TBJ5 459 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 GIPC2Q8TF65 315 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 STAG1Q8WVM7 1258 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 MYL10Q9BUA6 226 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 SLC12A9Q9BXP2 914 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 GZF1Q9H116 711 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-226ENST00000554350 CHMP4BQ9H444 224 aaKnown RBP6.55□□□□□ -1.36
ATXN3-226ENST00000554350 FPGT-TNNI3KV9GXZ4 949 aa6.55□□□□□ -1.36
ATXN3-226ENST00000554350 MYH4Q9Y623 1939 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 ZNF532Q9HCE3 1301 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 RALGAPA1Q6GYQ0 2036 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 TBKBP1A7MCY6 615 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 NUDT19A8MXV4 375 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 LRP3O75074 770 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 BCAR3O75815 825 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 PDE6AP16499 860 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 ENDOUP21128 410 aaKnown RBP6.54□□□□□ -1.36
ATXN3-226ENST00000554350 MCCP23508 829 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 IGFBP6P24592 240 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-226ENST00000554350 NOVA1P51513 510 aaKnown RBP6.54□□□□□ -1.36
ATXN3-226ENST00000554350 CYP4F8P98187 520 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 PTPN14Q15678 1187 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 ALDH1L2Q3SY69 923 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 CCDC62Q6P9F0 684 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 KCTD1Q719H9 257 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 CABP7Q86V35 215 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 SYT8Q8NBV8 401 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 GMCL1P1Q8NEA9 526 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 NUP43Q8NFH3 380 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 PPTC7Q8NI37 304 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 CXorf38Q8TB03 319 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 MRPS27Q92552 414 aaKnown RBP6.54□□□□□ -1.36
ATXN3-226ENST00000554350 SHDQ96IW2 340 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 NGRNQ9NPE2 291 aaKnown RBP6.54□□□□□ -1.36
ATXN3-226ENST00000554350 ATP8A2Q9NTI2 1148 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 TTC3P53804 2025 aa6.54□□□□□ -1.36
ATXN3-226ENST00000554350 MIA3Q5JRA6 1907 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 IPO8O15397 1037 aaKnown RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 CLASP2O75122 1294 aaKnown RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 MBD4O95243 580 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 TTLL1O95922 423 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 TOP3BO95985 862 aaKnown RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 ICAM1P05362 532 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 GSNP06396 782 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 GNAT1P11488 350 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SCG2P13521 617 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 NCKAP1LP55160 1127 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 KRT17Q04695 432 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SMC1AQ14683 1233 aaKnown RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 LPIN1Q14693 890 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 CCDC6Q16204 474 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 CCDC96Q2M329 555 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 COL28A1Q2UY09 1125 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SKOR2Q2VWA4 1001 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 PLEKHN1Q494U1 663 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 ZKSCAN2Q63HK3 967 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 LARP1BQ659C4 914 aaKnown RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 TMED8Q6PL24 325 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SLC44A3Q8N4M1 653 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 ARHGAP45Q92619 1136 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 CEP95Q96GE4 821 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SPATA33Q96N06 139 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 MEIS3Q99687 375 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SRRTQ9BXP5 876 aaKnown RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 CCDC8Q9H0W5 538 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SMC4Q9NTJ3 1288 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 SETD4Q9NVD3 440 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 PLA2G2DQ9UNK4 145 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 MRVI1Q9Y6F6 885 aa6.53□□□□□ -1.36
ATXN3-226ENST00000554350 KANSL1LA0AUZ9 987 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 H0Y8X5 98 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 CHRNA1P02708 482 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 EPCAMP16422 314 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 LAG3P18627 525 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 EDNRBP24530 442 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 CD52P31358 61 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 ARL4AP40617 200 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 PMS1P54277 932 aaKnown RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 RPS6P62753 249 aaKnown RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 SIM2Q14190 667 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 BMS1Q14692 1282 aaKnown RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 SF3A2Q15428 464 aaKnown RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 STPG1Q5TH74 334 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 TDRD10Q5VZ19 366 aaKnown RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 KIAA1211LQ6NV74 962 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 TSHZ1Q6ZSZ6 1077 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 RSPH3Q86UC2 560 aa6.52□□□□□ -1.37
ATXN3-226ENST00000554350 ZNF444Q8N0Y2 327 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 TAB3Q8N5C8 712 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-226ENST00000554350 CELF5Q8N6W0 485 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms