RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 DOCK6Q96HP0 2047 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 A0A087WZ62 844 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 IPO5O00410 1097 aaKnown RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 MAN2B1O00754 1011 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 SART1O43290 800 aaKnown RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 ZNF862O60290 1169 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 KCNK5O95279 499 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 POMCP01189 267 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 CYP21A2P08686 494 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 HNRNPA1P09651 372 aaKnown RBP eCLIP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 ESRRAP11474 423 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 SREBF1P36956 1147 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 OR1G1P47890 313 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 CXCL12P48061 93 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 ANTXR2P58335 489 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 NTHL1P78549 312 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 DRP2Q13474 957 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 AASDHQ4L235 1098 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 ZNF654Q8IZM8 581 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 NCOA7Q8NI08 942 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 ITFG1Q8TB96 612 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 KXD1Q9BQD3 176 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 FDXACB1Q9BRP7 624 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 LSM14BQ9BX40 385 aaKnown RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 ANO3Q9BYT9 981 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 KCNF1Q9H3M0 494 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 SOX17Q9H6I2 414 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-224ENST00000554040 LMAN1LQ9HAT1 526 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 RIC8AQ9NPQ8 531 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 CNTNAP2Q9UHC6 1331 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 DMXL2Q8TDJ6 3036 aa7.68□□□□□ -1.18
ATXN3-224ENST00000554040 DSPP15924 2871 aaKnown RBP7.67□□□□□ -1.18
ATXN3-224ENST00000554040 LAMA4Q16363 1823 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 IGKV6-21A0A0C4DH24 114 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 TMEM8BA6NDV4 472 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 SRRM3A6NNA2 597 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-224ENST00000554040 METTL12A8MUP2 240 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 CHURC1-FNTBB4DL54 471 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 E7EWF7 191 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 ECI2O75521 394 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 CYP3A4P08684 503 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 ZNF806P0C7X5 589 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 EDN3P14138 238 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 RPL17P18621 184 aaKnown RBP7.67□□□□□ -1.18
ATXN3-224ENST00000554040 FNTBP49356 437 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 CREMQ03060 361 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 RING1Q06587 406 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 DSC1Q08554 894 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 TARBP2Q15633 366 aaKnown RBP7.67□□□□□ -1.18
ATXN3-224ENST00000554040 USP41Q3LFD5 358 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 STPG1Q5TH74 334 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 FDX2Q6P4F2 183 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 CATSPER4Q7RTX7 472 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 HEATR3Q7Z4Q2 680 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 RALYLQ86SE5 291 aaKnown RBP7.67□□□□□ -1.18
ATXN3-224ENST00000554040 ZNF410Q86VK4 478 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 GLYCTKQ8IVS8 523 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 SHISA5Q8N114 240 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 TMTC2Q8N394 836 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 SMG8Q8ND04 991 aaKnown RBP7.67□□□□□ -1.18
ATXN3-224ENST00000554040 ZNF577Q9BSK1 485 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 COLEC11Q9BWP8 271 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 PLA2G2FQ9BZM2 168 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 UBN1Q9NPG3 1134 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 FBXW11Q9UKB1 542 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 KCNH3Q9ULD8 1083 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 NDRG2Q9UN36 371 aaKnown RBP7.67□□□□□ -1.18
ATXN3-224ENST00000554040 COL4A3Q01955 1670 aa7.67□□□□□ -1.18
ATXN3-224ENST00000554040 MIA3Q5JRA6 1907 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 IGLV3-22A0A075B6J6 115 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 WDR64B1ANS9 1081 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 F8W810 466 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 FAM13AO94988 1023 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 NCLP19338 710 aaKnown RBP7.66□□□□□ -1.18
ATXN3-224ENST00000554040 MAP4P27816 1152 aaKnown RBP7.66□□□□□ -1.18
ATXN3-224ENST00000554040 HOXA9P31269 272 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 HOXA11P31270 313 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-224ENST00000554040 ARL4DP49703 201 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 DNM2P50570 870 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 SATB1Q01826 763 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 SRSF5Q13243 272 aaKnown RBP7.66□□□□□ -1.18
ATXN3-224ENST00000554040 AP3B2Q13367 1082 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 SF3A2Q15428 464 aaKnown RBP7.66□□□□□ -1.18
ATXN3-224ENST00000554040 PPM1LQ5SGD2 360 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 UBXN11Q5T124 520 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 WWC2Q6AWC2 1192 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 FUT10Q6P4F1 479 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 LONP2Q86WA8 852 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 MB21D2Q8IYB1 491 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-224ENST00000554040 C12orf50Q8NA57 414 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-224ENST00000554040 TTC16Q8NEE8 873 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 FAM3CQ92520 227 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 DNASE1L2Q92874 299 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 B3GALT6Q96L58 329 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 CEP89Q96ST8 783 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 MTA3Q9BTC8 594 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 LNPKQ9C0E8 428 aa7.66□□□□□ -1.18
ATXN3-224ENST00000554040 IL25Q9H293 177 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms