RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 GPS2Q13227 327 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 DENND1BQ6P3S1 775 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 NME8Q8N427 588 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 SLC4A11Q8NBS3 891 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 FEZF2Q8TBJ5 459 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 ZBTB9Q96C00 473 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 HHIPL1Q96JK4 782 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 ZMAT2Q96NC0 199 aaKnown RBP20.32■□□□□ 0.84
BRF1-215ENST00000549655 ELOVL4Q9GZR5 314 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 NXF3Q9H4D5 531 aaKnown RBP20.32■□□□□ 0.84
BRF1-215ENST00000549655 PIN4Q9Y237 131 aaKnown RBP20.32■□□□□ 0.84
BRF1-215ENST00000549655 KPNA6O60684 536 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 STAU1O95793 577 aaKnown RBP20.32■□□□□ 0.84
BRF1-215ENST00000549655 FLT3LGP49771 235 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 CRYBB1P53674 252 aaPredicted RBP20.32■□□□□ 0.84
BRF1-215ENST00000549655 GJA9P57773 515 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 CYP4F22Q6NT55 531 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 ERICH1Q86X53 443 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 TMEM176AQ96HP8 235 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 ACBD3Q9H3P7 528 aa20.32■□□□□ 0.84
BRF1-215ENST00000549655 TTI1O43156 1089 aa20.31■□□□□ 0.84
BRF1-215ENST00000549655 OAS2P29728 719 aaKnown RBP20.31■□□□□ 0.84
BRF1-215ENST00000549655 PTPN11Q06124 597 aaPredicted RBP20.31■□□□□ 0.84
BRF1-215ENST00000549655 CAVIN3Q969G5 261 aa20.31■□□□□ 0.84
BRF1-215ENST00000549655 CELF4Q9BZC1 486 aaKnown RBP20.31■□□□□ 0.84
BRF1-215ENST00000549655 LHX5Q9H2C1 402 aa20.31■□□□□ 0.84
BRF1-215ENST00000549655 RALGAPA2Q2PPJ7 1873 aa20.31■□□□□ 0.84
BRF1-215ENST00000549655 H3BQF6 201 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 RECQL4O94761 1208 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 PGK1P00558 417 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 RPL7AP62424 266 aaKnown RBP20.3■□□□□ 0.84
BRF1-215ENST00000549655 MYO1EQ12965 1108 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 ZBTB6Q15916 424 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 DAB2IPQ5VWQ8 1189 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 ALKAL1Q6UXT8 129 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 SLC13A5Q86YT5 568 aaPredicted RBP20.3■□□□□ 0.84
BRF1-215ENST00000549655 SMC1BQ8NDV3 1235 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.3■□□□□ 0.84
BRF1-215ENST00000549655 MTG1Q9BT17 334 aaPredicted RBP20.3■□□□□ 0.84
BRF1-215ENST00000549655 APOL6Q9BWW8 343 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 PLVAPQ9BX97 442 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.3■□□□□ 0.84
BRF1-215ENST00000549655 TCRBV5S1A1TA0A578 114 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 BHMG1C9JSJ3 638 aaPredicted RBP20.3■□□□□ 0.84
BRF1-215ENST00000549655 ALDH1A1P00352 501 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 AKAP5P24588 427 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 DNAJC24Q6P3W2 148 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 CXCL17Q6UXB2 119 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 ZDHHC14Q8IZN3 488 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 PRELID2Q8N945 189 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 GPBP1L1Q9HC44 474 aaPredicted RBP20.3■□□□□ 0.84
BRF1-215ENST00000549655 CNTN3Q9P232 1028 aa20.3■□□□□ 0.84
BRF1-215ENST00000549655 BARX2Q9UMQ3 279 aaPredicted RBP20.3■□□□□ 0.84
BRF1-215ENST00000549655 TCRBV7S2A1N4TA0A589 114 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 TMEM191CA6NGB0 347 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 FAM153BP0C7A2 387 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 PRKCZQ05513 592 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 INCA1Q0VD86 236 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 CUL1Q13616 776 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 KCTD19Q17RG1 926 aaPredicted RBP20.29■□□□□ 0.84
BRF1-215ENST00000549655 FAM153CQ494X1 144 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 GLRA4Q5JXX5 417 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 TAF2Q6P1X5 1199 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 EIF1ADQ8N9N8 165 aaKnown RBP20.29■□□□□ 0.84
BRF1-215ENST00000549655 BEST2Q8NFU1 509 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 C18orf25Q96B23 403 aaPredicted RBP20.29■□□□□ 0.84
BRF1-215ENST00000549655 TUBGCP4Q9UGJ1 667 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 IP6K2Q9UHH9 426 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 FAM153AQ9UHL3 310 aa20.29■□□□□ 0.84
BRF1-215ENST00000549655 PHF2O75151 1096 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 NDST1P52848 882 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 DR1Q01658 176 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 TRIM32Q13049 653 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 NNTQ13423 1086 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 CYP4A22Q5TCH4 519 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 DDX27Q96GQ7 796 aaKnown RBP20.28■□□□□ 0.84
BRF1-215ENST00000549655 HEXIM2Q96MH2 286 aaKnown RBP20.28■□□□□ 0.84
BRF1-215ENST00000549655 MCEEQ96PE7 176 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 UPF3AQ9H1J1 476 aaKnown RBP20.28■□□□□ 0.84
BRF1-215ENST00000549655 FAM124BQ9H5Z6 455 aaPredicted RBP20.28■□□□□ 0.84
BRF1-215ENST00000549655 SPC25Q9HBM1 224 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 RNF19AQ9NV58 838 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 CYTH4Q9UIA0 394 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 MTUS1Q9ULD2 1270 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 UTP11Q9Y3A2 253 aaKnown RBP20.28■□□□□ 0.84
BRF1-215ENST00000549655 SCN1AP35498 2009 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 PPEF2O14830 753 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 MAN1A1P33908 653 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 HLTFQ14527 1009 aaKnown RBP eCLIP20.28■□□□□ 0.84
BRF1-215ENST00000549655 NBPF20Q3BBV1 942 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 PTPN20Q4JDL3 420 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 UBXN11Q5T124 520 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 DDX42Q86XP3 938 aaKnown RBP eCLIP20.28■□□□□ 0.84
BRF1-215ENST00000549655 RHOT1Q8IXI2 618 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 TTC39CQ8N584 583 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 MAGOHBQ96A72 148 aaKnown RBP20.28■□□□□ 0.84
BRF1-215ENST00000549655 C18orf8Q96DM3 657 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.28■□□□□ 0.841e-6■■■■□ 23.6
BRF1-215ENST00000549655 STRIP2Q9ULQ0 834 aa20.28■□□□□ 0.84
BRF1-215ENST00000549655 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms