RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 STOML1Q9UBI4 398 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 RPL26L1Q9UNX3 145 aaKnown RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 ZNF148Q9UQR1 794 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 COL4A5P29400 1685 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 LOXHD1Q8IVV2 1947 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 SIGLEC16A6NMB1 481 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 NPM3O75607 178 aaKnown RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 SNUPNO95149 360 aaKnown RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 VHLP40337 213 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 PAPOLAP51003 745 aaKnown RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 NOP14P78316 857 aaKnown RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 SPP2Q13103 211 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 SPDYAQ5MJ70 313 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 RSBN1LQ6PCB5 846 aaPredicted RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 ANKMY2Q8IV38 441 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 POMGNT1Q8WZA1 660 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 SAR1AQ9NR31 198 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 METTL5Q9NRN9 209 aaKnown RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 ARL8BQ9NVJ2 186 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 PSMC3IPQ9P2W1 217 aaPredicted RBP14.49□□□□□ -0.09
HDAC7-228ENST00000548938 ASB3Q9Y575 518 aa14.49□□□□□ -0.09
HDAC7-228ENST00000548938 LMNAP02545 664 aaKnown RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 TCF4P15884 667 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 DSG3P32926 999 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 NCKAP1LP55160 1127 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 RNF220Q5VTB9 566 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 OGFOD1Q8N543 542 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 EXD1Q8NHP7 514 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 TRIM11Q96F44 468 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 PRR11Q96HE9 360 aaPredicted RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 MXRA8Q9BRK3 442 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 ST6GALNAC4Q9H4F1 302 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 EHMT1Q9H9B1 1298 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 A0A0G2JND7 137 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 GOLGA8SH3BPF8 625 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 GOLGA8MH3BSY2 632 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 ATF7P17544 494 aaPredicted RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 CNGA1P29973 690 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 NFX1Q12986 1120 aaKnown RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 KPNB1Q14974 876 aaKnown RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 RBBP5Q15291 538 aaKnown RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 UGCGQ16739 394 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 CCDC142Q17RM4 750 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 ACSBG2Q5FVE4 666 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 FAM102BQ5T8I3 360 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 SNX30Q5VWJ9 437 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 CEP120Q8N960 986 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 ACER1Q8TDN7 264 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 HAUS1Q96CS2 278 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 GMLQ99445 158 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 KCNH7Q9NS40 1196 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 ANKFY1Q9P2R3 1169 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 TBX20Q9UMR3 447 aa14.48□□□□□ -0.09
HDAC7-228ENST00000548938 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
HDAC7-228ENST00000548938 CFAP69A5D8W1 941 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 TROVE2P10155 538 aaKnown RBP eCLIP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PIK3CAP42336 1068 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 GCNT1Q02742 428 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PDIA2Q13087 525 aaKnown RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 RCN2Q14257 317 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 ZFYVE27Q5T4F4 411 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PLA2G4FQ68DD2 849 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 IRGCQ6NXR0 463 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 EGFL6Q8IUX8 553 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PHC3Q8NDX5 983 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 IL31RAQ8NI17 732 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 ALG13Q9NP73 1137 aaKnown RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 C2CD2Q9Y426 696 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 GOLGA8RI6L899 631 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 HAUS5O94927 633 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 ZWINTO95229 277 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 CYP1A1P04798 512 aaPredicted RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 YWHABP31946 246 aaKnown RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 GPX6P59796 221 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 LMNB2Q03252 620 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 GAD2Q05329 585 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 CYP24A1Q07973 514 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 MAMLD1Q13495 774 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 EAPPQ56P03 285 aaPredicted RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 LMBRD2Q68DH5 695 aaPredicted RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 CWF19L1Q69YN2 538 aaKnown RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 SLC39A4Q6P5W5 647 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 ZNF276Q8N554 614 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 TMEM161BQ8NDZ6 487 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PTPRN2Q92932 1015 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PTCD3Q96EY7 689 aaKnown RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 KLF6Q99612 283 aaPredicted RBP14.47□□□□□ -0.09
HDAC7-228ENST00000548938 C1orf112Q9NSG2 853 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PIM2Q9P1W9 311 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 HEY2Q9UBP5 337 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 SLC24A2Q9UI40 661 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 LRCH1Q9Y2L9 728 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 PCDHB2Q9Y5E7 798 aa14.47□□□□□ -0.09
HDAC7-228ENST00000548938 ALOX15BO15296 676 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 DHX15O43143 795 aaKnown RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 CCDC22O60826 627 aa14.46□□□□□ -0.09
HDAC7-228ENST00000548938 QARSP47897 775 aaKnown RBP14.46□□□□□ -0.09
HDAC7-228ENST00000548938 RAB27AP51159 221 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms