RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ZMIZ1Q9ULJ6 1067 aa14.73□□□□□ -0.05
CDX2-202ENST00000548877 SLC8A2Q9UPR5 921 aa14.73□□□□□ -0.05
CDX2-202ENST00000548877 STK24Q9Y6E0 443 aa14.73□□□□□ -0.05
CDX2-202ENST00000548877 TTC26A0AVF1 554 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 TMEM8BA6NDV4 472 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 C1QTNF9BB2RNN3 333 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 C1QTNF9P0C862 333 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 CCT6AP40227 531 aaKnown RBP14.72□□□□□ -0.05
CDX2-202ENST00000548877 PXNP49023 591 aaPredicted RBP14.72□□□□□ -0.05
CDX2-202ENST00000548877 MCL1Q07820 350 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 GRSF1Q12849 480 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDX2-202ENST00000548877 COL9A2Q14055 689 aaPredicted RBP14.72□□□□□ -0.05
CDX2-202ENST00000548877 TRIM29Q14134 588 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 BECN1Q14457 450 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 NOLC1Q14978 699 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDX2-202ENST00000548877 ME3Q16798 604 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 PSAPL1Q6NUJ1 521 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 USP37Q86T82 979 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 GPIHBP1Q8IV16 184 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 C4orf32Q8N8J7 132 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 NECAB1Q8N987 351 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 ATAD1Q8NBU5 361 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 SPIRE2Q8WWL2 714 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 DRC1Q96MC2 740 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 TIPINQ9BVW5 301 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 HPS4Q9NQG7 708 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 EBF1Q9UH73 591 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 KCNG1Q9UIX4 513 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 UBQLN1Q9UMX0 589 aaKnown RBP14.72□□□□□ -0.05
CDX2-202ENST00000548877 KIAA1024Q9UPX6 916 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 SLC27A5Q9Y2P5 690 aa14.72□□□□□ -0.05
CDX2-202ENST00000548877 TIMM13Q9Y5L4 95 aaPredicted RBP14.72□□□□□ -0.05
CDX2-202ENST00000548877 ZFYVE26Q68DK2 2539 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 KIAA1549LQ6ZVL6 1849 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 MYH11P35749 1972 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 ZNF638Q14966 1978 aaKnown RBP14.71□□□□□ -0.05
CDX2-202ENST00000548877 BCLAF3A2AJT9 711 aaKnown RBP14.71□□□□□ -0.05
CDX2-202ENST00000548877 SOBPA7XYQ1 873 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 HIP1RO75146 1068 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 LARGE1O95461 756 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 ADRB2P07550 413 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 CLTAP09496 248 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 CDC25CP30307 473 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 ANAPC15P60006 121 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 RUNX3Q13761 415 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 KARSQ15046 597 aaKnown RBP14.71□□□□□ -0.05
CDX2-202ENST00000548877 OVOS1Q6IE37 1185 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 C1orf186Q6ZWK4 172 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 TTC9BQ8N6N2 239 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 IGSF22Q8N9C0 903 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 SLC46A2Q9BY10 475 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 SMOC1Q9H4F8 434 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 GKN1Q9NS71 199 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 DDX19AQ9NUU7 478 aaKnown RBP14.71□□□□□ -0.05
CDX2-202ENST00000548877 ANK1P16157 1881 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 IGF2RP11717 2491 aa14.71□□□□□ -0.05
CDX2-202ENST00000548877 TSC2P49815 1807 aa14.71□□□□□ -0.06
CDX2-202ENST00000548877 JAK2O60674 1132 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 RHOBTB1O94844 696 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 SEC24BO95487 1268 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 CSRP1P21291 193 aaKnown RBP14.7□□□□□ -0.06
CDX2-202ENST00000548877 DRD1P21728 446 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 GUCY2CP25092 1073 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 TUFMP49411 452 aaKnown RBP14.7□□□□□ -0.06
CDX2-202ENST00000548877 NOVA1P51513 510 aaKnown RBP14.7□□□□□ -0.06
CDX2-202ENST00000548877 AMPD2Q01433 879 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 ZNF174Q15697 407 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 FBXO43Q4G163 708 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 RINT1Q6NUQ1 792 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 SYT13Q7L8C5 426 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 CMTM8Q8IZV2 173 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 TMEM161BQ8NDZ6 487 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 EDEM2Q9BV94 578 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 FOXP1Q9H334 677 aaPredicted RBP14.7□□□□□ -0.06
CDX2-202ENST00000548877 LRWD1Q9UFC0 647 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 TBX20Q9UMR3 447 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 DNM3Q9UQ16 869 aa14.7□□□□□ -0.06
CDX2-202ENST00000548877 FASNP49327 2511 aaKnown RBP14.7□□□□□ -0.06
CDX2-202ENST00000548877 OBSL1O75147 1896 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 MYO16Q9Y6X6 1858 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 ABCA7Q8IZY2 2146 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 OTOL1A6NHN0 477 aaPredicted RBP14.69□□□□□ -0.06
CDX2-202ENST00000548877 SLC16A4O15374 487 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 CLDN3O15551 220 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 XPOTO43592 962 aaKnown RBP14.69□□□□□ -0.06
CDX2-202ENST00000548877 CYP11A1P05108 521 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 CXCL8P10145 99 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 MAPTP10636 758 aaKnown RBP14.69□□□□□ -0.06
CDX2-202ENST00000548877 HARSP12081 509 aaKnown RBP14.69□□□□□ -0.06
CDX2-202ENST00000548877 CEACAM1P13688 526 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 ATF6P18850 670 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 DDX6P26196 483 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDX2-202ENST00000548877 TRAPPC10P48553 1259 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 LILRA4P59901 499 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 STRN3Q13033 797 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 SAFBQ15424 915 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDX2-202ENST00000548877 ELF2Q15723 593 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 SEZ6Q53EL9 994 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 DAB2IPQ5VWQ8 1189 aa14.69□□□□□ -0.06
CDX2-202ENST00000548877 TCEAL6Q6IPX3 200 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms