RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 RBAKQ9NYW8 714 aaPredicted RBP11.14□□□□□ -0.63
BEST3-208ENST00000547208 RCOR1Q9UKL0 485 aa11.14□□□□□ -0.63
BEST3-208ENST00000547208 ZDHHC9Q9Y397 364 aa11.14□□□□□ -0.63
BEST3-208ENST00000547208 HELZP42694 1942 aaKnown RBP11.13□□□□□ -0.63
BEST3-208ENST00000547208 PTPRJQ12913 1337 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 GVINP1Q7Z2Y8 2422 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 KPNA7A9QM74 516 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 CYB561D2O14569 222 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 EIF3DO15371 548 aaKnown RBP eCLIP11.13□□□□□ -0.63
BEST3-208ENST00000547208 POLR2DO15514 142 aaKnown RBP11.13□□□□□ -0.63
BEST3-208ENST00000547208 TGFB1I1O43294 461 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 ECI2O75521 394 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 LDHAP00338 332 aaKnown RBP11.13□□□□□ -0.63
BEST3-208ENST00000547208 ASIC1P78348 528 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 FAM78AQ5JUQ0 283 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 TANGO2Q6ICL3 276 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 PHLDB3Q6NSJ2 640 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 LRRTM3Q86VH5 581 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 CCDC105Q8IYK2 499 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 ATAD1Q8NBU5 361 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 ZNF507Q8TCN5 953 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 CHAMP1Q96JM3 812 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 ZSWIM3Q96MP5 696 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 PYM1Q9BRP8 204 aaKnown RBP11.13□□□□□ -0.63
BEST3-208ENST00000547208 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
BEST3-208ENST00000547208 LRRC27Q9C0I9 530 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 ZCWPW1Q9H0M4 648 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 PDE11AQ9HCR9 933 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 DLGAP2Q9P1A6 1054 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 HSFX1Q9UBD0 423 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 DSEQ9UL01 958 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 CACNA1IQ9P0X4 2223 aa11.13□□□□□ -0.63
BEST3-208ENST00000547208 NCANO14594 1321 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 EP300Q09472 2414 aaPredicted RBP11.12□□□□□ -0.63
BEST3-208ENST00000547208 SHISA7A6NL88 538 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 ZNF197O14709 1029 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 SOAT2O75908 522 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 ITGB3P05106 788 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 GJA1P17302 382 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 POLR2BP30876 1174 aaKnown RBP11.12□□□□□ -0.63
BEST3-208ENST00000547208 ME1P48163 572 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 CLCN6P51797 869 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 STARD6P59095 220 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
BEST3-208ENST00000547208 AMPD3Q01432 767 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 SV2CQ496J9 727 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 WSCD1Q658N2 575 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 IQCEQ6IPM2 695 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 ARMCX5Q6P1M9 558 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 UNC13DQ70J99 1090 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 PDZD4Q76G19 769 aaPredicted RBP11.12□□□□□ -0.63
BEST3-208ENST00000547208 CBWD2Q8IUF1 395 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 GPD1LQ8N335 351 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 DTWD2Q8NBA8 298 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 LEMD2Q8NC56 503 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 SHKBP1Q8TBC3 707 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 ELSPBP1Q96BH3 223 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
BEST3-208ENST00000547208 ASB16Q96NS5 453 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 MTMR12Q9C0I1 747 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 ASAH2Q9NR71 780 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 SIX4Q9UIU6 781 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 CFAP45Q9UL16 551 aa11.12□□□□□ -0.63
BEST3-208ENST00000547208 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
BEST3-208ENST00000547208 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
BEST3-208ENST00000547208 MYL4P12829 197 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 GLULP15104 373 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 ATF6P18850 670 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 PNPLA4P41247 253 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 CDR1P51861 262 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 PLD1Q13393 1074 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 SNW1Q13573 536 aaKnown RBP11.11□□□□□ -0.63
BEST3-208ENST00000547208 CUL4BQ13620 913 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 TEAD2Q15562 447 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 MLF2Q15773 248 aaPredicted RBP11.11□□□□□ -0.63
BEST3-208ENST00000547208 BMT2Q1RMZ1 405 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 SLC39A12Q504Y0 691 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 CYP4A22Q5TCH4 519 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 STXBP4Q6ZWJ1 553 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 GAREM2Q75VX8 874 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 GRAMD1CQ8IYS0 662 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 ELMOD1Q8N336 334 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 PDCL2Q8N4E4 241 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 LRRC52Q8N7C0 313 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 PJA1Q8NG27 643 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 OR5B17Q8NGF7 314 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 PSMG2Q969U7 264 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 ZNF560Q96MR9 790 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 MKNK1Q9BUB5 465 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 FOXQ1Q9C009 403 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
BEST3-208ENST00000547208 IRF2BPLQ9H1B7 796 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 BLZF1Q9H2G9 400 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
BEST3-208ENST00000547208 ZNF334Q9HCZ1 680 aaPredicted RBP11.11□□□□□ -0.63
BEST3-208ENST00000547208 AGPAT3Q9NRZ7 376 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms