RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 IQCDQ96DY2 449 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 MRFAP1L1Q96HT8 127 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 ARID3AQ99856 593 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 NUP58Q9BVL2 599 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 OXCT2Q9BYC2 517 aaPredicted RBP13.9□□□□□ -0.18
CDCA3-210ENST00000545368 LMAN2LQ9H0V9 348 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 ZBP1Q9H171 429 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 GANQ9H2C0 597 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
CDCA3-210ENST00000545368 CHST7Q9NS84 486 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 CISHQ9NSE2 258 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 FBXL5Q9UKA1 691 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 DNAJC12Q9UKB3 198 aa13.9□□□□□ -0.18
CDCA3-210ENST00000545368 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDCA3-210ENST00000545368 ITIH6Q6UXX5 1313 aa13.9□□□□□ -0.19
CDCA3-210ENST00000545368 A8MXQ7 604 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 C2CD2LO14523 706 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 GRM6O15303 877 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 TPM1P09493 284 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 WEE2P0C1S8 567 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 PCSK1P29120 753 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 MRE11P49959 708 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 CDH8P55286 799 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 POLR2FP61218 127 aaKnown RBP13.89□□□□□ -0.19
CDCA3-210ENST00000545368 INCA1Q0VD86 236 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 TRIM14Q14142 442 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
CDCA3-210ENST00000545368 PSMD5Q16401 504 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 PTPN21Q16825 1174 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 PTPROQ16827 1216 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 ARHGAP44Q17R89 818 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 CTXN3Q4LDR2 81 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 ZNF697Q5TEC3 545 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 SPECC1LQ69YQ0 1117 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 IQCEQ6IPM2 695 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 PDE12Q6L8Q7 609 aaKnown RBP13.89□□□□□ -0.19
CDCA3-210ENST00000545368 GJB7Q6PEY0 223 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 LIMS2Q7Z4I7 341 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 VSTM4Q8IW00 320 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 GPR65Q8IYL9 337 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 MICAL1Q8TDZ2 1067 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 KBTBD7Q8WVZ9 684 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 PIK3R5Q8WYR1 880 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 KAT5Q92993 513 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 SPAG5Q96R06 1193 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 MRPL45Q9BRJ2 306 aaKnown RBP13.89□□□□□ -0.19
CDCA3-210ENST00000545368 SDCBP2Q9H190 292 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 NGRNQ9NPE2 291 aaKnown RBP13.89□□□□□ -0.19
CDCA3-210ENST00000545368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDCA3-210ENST00000545368 DDX43Q9NXZ2 648 aaKnown RBP13.89□□□□□ -0.19
CDCA3-210ENST00000545368 CEP72Q9P209 647 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 FHOD1Q9Y613 1164 aa13.89□□□□□ -0.19
CDCA3-210ENST00000545368 RANBP2P49792 3224 aaKnown RBP13.88□□□□□ -0.19
CDCA3-210ENST00000545368 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-210ENST00000545368 OR6C75A6NL08 312 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 GABRDO14764 452 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 NOL4O94818 638 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 OAZ2O95190 189 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 CSPG5O95196 566 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 GNL1P36915 607 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-210ENST00000545368 FIGNQ5HY92 759 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 PLPP4Q5VZY2 271 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 SMYD5Q6GMV2 418 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 DPY19L2P1Q6NXN4 242 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 UNC93AQ86WB7 457 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 ANP32BQ92688 251 aaKnown RBP13.88□□□□□ -0.19
CDCA3-210ENST00000545368 KREMEN1Q96MU8 473 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 STK33Q9BYT3 514 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 NLRC4Q9NPP4 1024 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 MTRRQ9UBK8 725 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-210ENST00000545368 PCDHB4Q9Y5E5 795 aa13.88□□□□□ -0.19
CDCA3-210ENST00000545368 EPOPA6NHQ4 379 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 SOX1O00570 391 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-210ENST00000545368 EPHB6O15197 1021 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 CILPO75339 1184 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 ADCY5O95622 1261 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 KRT5P13647 590 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 DNAJB1P25685 340 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 USP8P40818 1118 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 NDST1P52848 882 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 ERVFC1P60507 584 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 TSPY1Q01534 308 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 MRPL58Q14197 206 aaKnown RBP13.87□□□□□ -0.19
CDCA3-210ENST00000545368 DRAP1Q14919 205 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-210ENST00000545368 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 KIAA0319Q5VV43 1072 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 TMEM270Q6UE05 265 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 PRSS55Q6UWB4 352 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-210ENST00000545368 TMC6Q7Z403 805 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 OSTM1Q86WC4 334 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 FMNL3Q8IVF7 1028 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 ZNF397Q8NF99 534 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-210ENST00000545368 LNX1Q8TBB1 728 aaPredicted RBP13.87□□□□□ -0.19
CDCA3-210ENST00000545368 SHC3Q92529 594 aa13.87□□□□□ -0.19
CDCA3-210ENST00000545368 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms