RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 ZDHHC5Q9C0B5 715 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 SP110Q9HB58 689 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 CYP39A1Q9NYL5 469 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 STOML1Q9UBI4 398 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 COA3Q9Y2R0 106 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PCDHGA9Q9Y5G4 932 aaKnown RBP7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PCDHGA8Q9Y5G5 932 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PCDHGA7Q9Y5G6 932 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PCDHGA6Q9Y5G7 932 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PCDHGA3Q9Y5H0 932 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 PCDHGA2Q9Y5H1 932 aa7.04□□□□□ -1.28
CPSF7-222ENST00000544585 ZNF536O15090 1300 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 FRMPD2Q68DX3 1309 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-222ENST00000544585 RAD50Q92878 1312 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 DCXO43602 365 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 NCK2O43639 380 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 KDM1AO60341 852 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 HMMRO75330 724 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 H2AFYO75367 372 aaKnown RBP7.03□□□□□ -1.28
CPSF7-222ENST00000544585 AMY2AP04746 511 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 SLC3A2P08195 630 aaKnown RBP7.03□□□□□ -1.28
CPSF7-222ENST00000544585 COL6A2P12110 1019 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 GNAT2P19087 354 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 AMY2BP19961 511 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 SLC1A4P43007 532 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 GPR3P46089 330 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 NHLH1Q02575 133 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 IKQ13123 557 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-222ENST00000544585 COBLL1Q53SF7 1204 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 TMPRSS7Q7RTY8 843 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 CREG2Q8IUH2 290 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 ZZZ3Q8IYH5 903 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 AFAP1L1Q8TED9 768 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 ANLNQ9NQW6 1124 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 ACSS2Q9NR19 701 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 MAN1C1Q9NR34 630 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 ERVK13-1Q9NX77 482 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 MARCH2Q9P0N8 246 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 RAXQ9Y2V3 346 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 INSL6Q9Y581 213 aa7.03□□□□□ -1.28
CPSF7-222ENST00000544585 TMEM82A0PJX8 343 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 IFRD1O00458 451 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 SCDO00767 359 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 DVL2O14641 736 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 DGKIO75912 1065 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 GJB5O95377 273 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 CYP17A1P05093 508 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 ASGR2P07307 311 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 TSPY3P0CV98 308 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 TSPY8P0CW00 308 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 KCNA5P22460 613 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 MCCP23508 829 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 CD40P25942 277 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 COL8A1P27658 744 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 EGR3Q06889 387 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 BAATQ14032 418 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 GRM3Q14832 879 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 ZRSR2Q15696 482 aaKnown RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 PKN1Q16512 942 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 PTGISQ16647 500 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 TMEM63BQ5T3F8 832 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 IFIT1BQ5T764 474 aaKnown RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 IL31Q6EBC2 164 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 CNKSR3Q6P9H4 555 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 OTOP3Q7RTS5 596 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 FBXO16Q8IX29 292 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 SPACA3Q8IXA5 215 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 STK11IPQ8N1F8 1099 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 FAM181AQ8N9Y4 354 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 OR6J1Q8NGC5 347 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 NEK9Q8TD19 979 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 SCFD2Q8WU76 684 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 CEP95Q96GE4 821 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 FCRL2Q96LA5 508 aaPredicted RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 TEKT5Q96M29 485 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 ACAP3Q96P50 834 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 PRRX2Q99811 253 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 ARPC5LQ9BPX5 153 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 CHMP4BQ9H444 224 aaKnown RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 EPB41L1Q9H4G0 881 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 GULP1Q9UBP9 304 aa7.02□□□□□ -1.29
CPSF7-222ENST00000544585 ISY1Q9ULR0 285 aaKnown RBP7.02□□□□□ -1.29
CPSF7-222ENST00000544585 COL11A1P12107 1806 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-222ENST00000544585 UNC79Q9P2D8 2635 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 LINC01553A4QN01 128 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 C22orf46C9J442 243 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 CXCL10P02778 98 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 ICAM1P05362 532 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 CEACAM5P06731 702 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 IL9P15248 144 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 FPR2P25090 351 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 ALDH5A1P51649 535 aaPredicted RBP7.01□□□□□ -1.29
CPSF7-222ENST00000544585 NEK3P51956 506 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 WDR5P61964 334 aaKnown RBP7.01□□□□□ -1.29
CPSF7-222ENST00000544585 TFAP4Q01664 338 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 TEKQ02763 1124 aa7.01□□□□□ -1.29
CPSF7-222ENST00000544585 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms