RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 NOCTQ9UK39 431 aaKnown RBP16.43■□□□□ 0.22
VAMP1-207ENST00000539047 ATP8B3O60423 1300 aa16.43■□□□□ 0.22
VAMP1-207ENST00000539047 A8MXQ7 604 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 TMEM189-UBE2V1I3L0A0 370 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 KRT86O43790 486 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 KIF4AO95239 1232 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 LCA5LO95447 670 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 ACRP10323 421 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 ITGB8P26012 769 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 MAGEA1P43355 309 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 LHX1P48742 406 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 VAV2P52735 878 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 NDST1P52848 882 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 CDH8P55286 799 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 WDR5P61964 334 aaKnown RBP16.42■□□□□ 0.22
VAMP1-207ENST00000539047 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 CCDC122Q5T0U0 273 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 SCARA3Q6AZY7 606 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
VAMP1-207ENST00000539047 TMEM130Q8N3G9 435 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 SLC20A1Q8WUM9 679 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 DPF3Q92784 378 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 SENP8Q96LD8 212 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 SDCBP2Q9H190 292 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 KCND1Q9NSA2 647 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 TRMT1Q9NXH9 659 aaKnown RBP16.42■□□□□ 0.22
VAMP1-207ENST00000539047 PCDHA13Q9Y5I0 950 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
VAMP1-207ENST00000539047 A0A087X0T9 212 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 SPTLC1O15269 473 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 FAM228BP0C875 321 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 VDRP11473 427 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 WARSP23381 471 aaKnown RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 GNL1P36915 607 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 RAD23BP54727 409 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 ELAVL2Q12926 359 aaKnown RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 SOWAHAQ2M3V2 549 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 ASTE1Q2TB18 679 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 PAN2Q504Q3 1202 aaKnown RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 SPOUT1Q5T280 376 aaKnown RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 COLGALT2Q8IYK4 626 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 TOP1MTQ969P6 601 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 TRIM11Q96F44 468 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 PPP1R13BQ96KQ4 1090 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 HEXIM2Q96MH2 286 aaKnown RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
VAMP1-207ENST00000539047 NAGPAQ9UK23 515 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 FAN1Q9Y2M0 1017 aa16.41■□□□□ 0.22
VAMP1-207ENST00000539047 H0YGN5 161 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 KIF2AO00139 706 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 TADA2AO75478 443 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 DGKIO75912 1065 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 DDHD2O94830 711 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 LSM8O95777 96 aaKnown RBP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 ALDH2P05091 517 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 MMEP08473 750 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 PCSK1P29120 753 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 HOXD11P31277 338 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 AARSP49588 968 aaKnown RBP eCLIP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 CYP27A1Q02318 531 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 HABP4Q5JVS0 413 aaKnown RBP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 OTOP2Q7RTS6 562 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 ZNF280BQ86YH2 543 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 CMTR2Q8IYT2 770 aaKnown RBP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 THEM5Q8N1Q8 247 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 PDCL2Q8N4E4 241 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 SUSD3Q96L08 255 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 YME1L1Q96TA2 773 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 MRPL45Q9BRJ2 306 aaKnown RBP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 CACNG4Q9UBN1 327 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 INTUQ9ULD6 942 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 PRG3Q9Y2Y8 225 aaPredicted RBP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 NR2E3Q9Y5X4 410 aa16.4■□□□□ 0.22
VAMP1-207ENST00000539047 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.22
VAMP1-207ENST00000539047 PTPRSQ13332 1948 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 DDX3XO00571 662 aaKnown RBP eCLIP16.39■□□□□ 0.21
VAMP1-207ENST00000539047 ZNF500O60304 480 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-207ENST00000539047 RTN2O75298 545 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 H2AFZP0C0S5 128 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 GZMAP12544 262 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 TYMPP19971 482 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 BRD2P25440 801 aaKnown RBP16.39■□□□□ 0.21
VAMP1-207ENST00000539047 NSFP46459 744 aaKnown RBP16.39■□□□□ 0.21
VAMP1-207ENST00000539047 ALDH7A1P49419 539 aaKnown RBP16.39■□□□□ 0.21
VAMP1-207ENST00000539047 GATMP50440 423 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 FMO1Q01740 532 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-207ENST00000539047 H2AFVQ71UI9 128 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 CRIPAKQ8N1N5 446 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 SLC4A11Q8NBS3 891 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 TMEM35BQ8NCS4 154 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 C3orf58Q8NDZ4 430 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 LNX1Q8TBB1 728 aaPredicted RBP16.39■□□□□ 0.21
VAMP1-207ENST00000539047 HASPINQ8TF76 798 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
VAMP1-207ENST00000539047 CTNNBL1Q8WYA6 563 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms