RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 GJB6O95452 261 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 SNAI1O95863 264 aaPredicted RBP16.6■□□□□ 0.25
MKS1-204ENST00000537529 PAEPP09466 180 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 GJC1P36383 396 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 PTK6Q13882 451 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 DAB2IPQ5VWQ8 1189 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 JADE1Q6IE81 842 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 DCUN1D2Q6PH85 259 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 DPP9Q86TI2 863 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 C1orf127Q8N9H9 656 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
MKS1-204ENST00000537529 SCLT1Q96NL6 688 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 MCEEQ96PE7 176 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 PPP1R16BQ96T49 567 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 ASB7Q9H672 318 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 CHST7Q9NS84 486 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 STRIP2Q9ULQ0 834 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 TCRBV5S1A1TA0A578 114 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 VTNP04004 478 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 CD19P15391 556 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 ATICP31939 592 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 RPL7AP62424 266 aaKnown RBP16.6■□□□□ 0.25
MKS1-204ENST00000537529 MKRN3Q13064 507 aaKnown RBP16.6■□□□□ 0.25
MKS1-204ENST00000537529 KLF1Q13351 362 aaPredicted RBP16.6■□□□□ 0.25
MKS1-204ENST00000537529 PDCLQ13371 301 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 LRRC38Q5VT99 294 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 GPR142Q7Z601 462 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 NLRP7Q8WX94 980 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 ATG4AQ8WYN0 398 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 HERPUD2Q9BSE4 406 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 OSBPL8Q9BZF1 889 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 LHX5Q9H2C1 402 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 ASIC3Q9UHC3 531 aa16.6■□□□□ 0.25
MKS1-204ENST00000537529 H3BRB1 525 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 O00370 1275 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 P4HA1P13674 534 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 POLR2BP30876 1174 aaKnown RBP16.59■□□□□ 0.25
MKS1-204ENST00000537529 FKBP1BP68106 108 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 GRB14Q14449 540 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 WDR72Q3MJ13 1102 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
MKS1-204ENST00000537529 DENND1BQ6P3S1 775 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 RCOR2Q8IZ40 523 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 C3orf20Q8ND61 904 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 SNF8Q96H20 258 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 CPB2Q96IY4 423 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 CCDC114Q96M63 670 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 PARK7Q99497 189 aaKnown RBP16.59■□□□□ 0.25
MKS1-204ENST00000537529 HEMGNQ9BXL5 484 aa16.59■□□□□ 0.25
MKS1-204ENST00000537529 TUT1Q9H6E5 874 aaKnown RBP16.59■□□□□ 0.25
MKS1-204ENST00000537529 BCCIPQ9P287 314 aaKnown RBP eCLIP16.59■□□□□ 0.25
MKS1-204ENST00000537529 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.58■□□□□ 0.25
MKS1-204ENST00000537529 CSDE1O75534 798 aaKnown RBP16.58■□□□□ 0.25
MKS1-204ENST00000537529 KRT1P04264 644 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 ITGB3P05106 788 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 ARF4P18085 180 aaPredicted RBP16.58■□□□□ 0.25
MKS1-204ENST00000537529 RAP1GAPP47736 663 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 PIGHQ14442 188 aaPredicted RBP16.58■□□□□ 0.25
MKS1-204ENST00000537529 GRIK4Q16099 956 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 CCNG2Q16589 344 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 DUSP28Q4G0W2 176 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 CROCCP2Q86T23 111 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 ATL2Q8NHH9 583 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 EPB41L4BQ9H329 900 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 CYP3A43Q9HB55 503 aa16.58■□□□□ 0.25
MKS1-204ENST00000537529 MMP3P08254 477 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 HOXD8P13378 290 aaPredicted RBP16.58■□□□□ 0.24
MKS1-204ENST00000537529 ITIH2P19823 946 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 HPDP32754 393 aaPredicted RBP16.58■□□□□ 0.24
MKS1-204ENST00000537529 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
MKS1-204ENST00000537529 TMEM132DQ14C87 1099 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 PPP1R15BQ5SWA1 713 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
MKS1-204ENST00000537529 ZNF410Q86VK4 478 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 WDTC1Q8N5D0 677 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 NIPA2Q8N8Q9 360 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 OR6J1Q8NGC5 347 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 MAML3Q96JK9 1138 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 VRTNQ9H8Y1 702 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 R3HDM2Q9Y2K5 976 aaKnown RBP16.58■□□□□ 0.24
MKS1-204ENST00000537529 ANK1P16157 1881 aa16.58■□□□□ 0.24
MKS1-204ENST00000537529 TSPAN1O60635 241 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 RARGP13631 454 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 ATF2P15336 505 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 SMPD1P17405 629 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 RAD23BP54727 409 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 CAV1Q03135 178 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 ZNF252P-AS1Q0IIN9 211 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 ZFYVE27Q5T4F4 411 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 PLEKHH3Q7Z736 793 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 ADPGKQ9BRR6 497 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 TSPYL1Q9H0U9 437 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 SDCBP2Q9H190 292 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 ABHD16BQ9H3Z7 469 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 SMYD3Q9H7B4 428 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 DDX56Q9NY93 547 aaKnown RBP16.57■□□□□ 0.24
MKS1-204ENST00000537529 MEFVO15553 781 aaPredicted RBP16.57■□□□□ 0.24
MKS1-204ENST00000537529 MDH1P40925 334 aaKnown RBP16.57■□□□□ 0.24
MKS1-204ENST00000537529 COPS2P61201 443 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 DGKDQ16760 1214 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms