RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ERVV-1B6SEH8 477 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 SMIM22K7EJ46 135 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 RNMTO43148 476 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 ECE2O60344 883 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 TRMUO75648 421 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 DCTN3O75935 186 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 LDHBP07195 334 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 CHRNB1P11230 501 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 ESRRAP11474 423 aaPredicted RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 PTPN4P29074 926 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 PIK3CAP42336 1068 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 SCNN1DP51172 638 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 BCAP31P51572 246 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 ATXN3P54252 364 aaPredicted RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 PSMC1P62191 440 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 ADAM17P78536 824 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 KLRC3Q07444 240 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 PDK3Q15120 406 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 MTFR1Q15390 333 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 PKN2Q16513 984 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 COL13A1Q5TAT6 717 aaPredicted RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 ZNF530Q6P9A1 599 aaPredicted RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 TRAF7Q6Q0C0 670 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 RGS9BPQ6ZS82 235 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 MCF2L2Q86YR7 1114 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 C4orf33Q8N1A6 199 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 RASGRP4Q8TDF6 673 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 HPS1Q92902 700 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 EGLN2Q96KS0 407 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 OLFM3Q96PB7 478 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 PANX3Q96QZ0 392 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 GPATCH1Q9BRR8 931 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 METTL22Q9BUU2 404 aaPredicted RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 HERC2P3Q9BVR0 1158 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 MXD3Q9BW11 206 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 NYXQ9GZU5 481 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 RNF38Q9H0F5 515 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 PABPC3Q9H361 631 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 SMYD3Q9H7B4 428 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 LUC7LQ9NQ29 371 aaKnown RBP3.93□□□□□ -1.78
MCF2-210ENST00000536274 ZDHHC18Q9NUE0 388 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 TAS2R1Q9NYW7 299 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 TMOD2Q9NZR1 351 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 CEP126Q9P2H0 1117 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 PI4KBQ9UBF8 816 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 ADAMTS6Q9UKP5 1117 aa3.93□□□□□ -1.78
MCF2-210ENST00000536274 MYO5AQ9Y4I1 1855 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 ABCC12Q96J65 1359 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 ZNF536O15090 1300 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 C15orf38-AP3S2A0A0A6YYH1 394 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CAPN8A6NHC0 703 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 ZSCAN5BA6NJL1 495 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 NRG2O14511 850 aaPredicted RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 TPPPO94811 219 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CLPTM1O96005 669 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 SERPINB2P05120 415 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RBP3P10745 1247 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 IDO1P14902 403 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 MCM7P33993 719 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 ADCY8P40145 1251 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 NR4A2P43354 598 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RPL21P46778 160 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 DNM2P50570 870 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PEX3P56589 373 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 YWHAGP61981 247 aaKnown RBP eCLIP3.92□□□□□ -1.78
MCF2-210ENST00000536274 MTM1Q13496 603 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 MED21Q13503 144 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 NFIXQ14938 502 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PSMD6Q15008 389 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 NTRK3Q16288 839 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 INAQ16352 499 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 USH1GQ495M9 461 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 MMEL1Q495T6 779 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TIGD2Q4W5G0 525 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 PDCD4Q53EL6 469 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 TJAP1Q5JTD0 557 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 DEPDC1Q5TB30 811 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RNF43Q68DV7 783 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 NANOGP8Q6NSW7 305 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RIPOR1Q6ZS17 1223 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 ARPINQ7Z6K5 226 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RALYLQ86SE5 291 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 C11orf74Q86VG3 221 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CPNE8Q86YQ8 564 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TBC1D10CQ8IV04 446 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 BRSK2Q8IWQ3 736 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 MB21D2Q8IYB1 491 aaPredicted RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 CENPSQ8N2Z9 138 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 SCAIQ8N9R8 606 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 IL17REQ8NFR9 667 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 CAPSLQ8WWF8 208 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RUBCNQ92622 972 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GFM2Q969S9 779 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 CCDC124Q96CT7 223 aaKnown RBP3.92□□□□□ -1.78
MCF2-210ENST00000536274 IQCDQ96DY2 449 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 FEM1CQ96JP0 617 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 GSDMAQ96QA5 445 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TXLNGYQ9BZA5 131 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 TMEM134Q9H6X4 195 aa3.92□□□□□ -1.78
MCF2-210ENST00000536274 RRAGCQ9HB90 399 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms