RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 SFR1Q86XK3 245 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 CCDC65Q8IXS2 484 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 CLDN23Q96B33 292 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 PLA2G2FQ9BZM2 168 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 ZSCAN16Q9H4T2 348 aaPredicted RBP14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 LMAN1LQ9HAT1 526 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 TRPV4Q9HBA0 871 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 PCDHB5Q9Y5E4 795 aa14.3□□□□□ -0.12
CLSTN3-205ENST00000535452 KPNA7A9QM74 516 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 KIAA0391O15091 583 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 CLSTN1O94985 981 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 KRT19P08727 400 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 TMEM191BP0C7N4 346 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 CCNE1P24864 410 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 VIPR2P41587 438 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 CXCL12P48061 93 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 GUCY2FP51841 1108 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 MYO1EQ12965 1108 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 STK38Q15208 465 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 SURF1Q15526 300 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 ZC2HC1CQ53FD0 456 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 ARID3BQ8IVW6 561 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 ATAD1Q8NBU5 361 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 SHKBP1Q8TBC3 707 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 MRPS31Q92665 395 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 TASP1Q9H6P5 420 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 BLOC1S4Q9NUP1 217 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 OBP2AQ9NY56 170 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 ABI2Q9NYB9 513 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 UXTQ9UBK9 157 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 MTF2Q9Y483 593 aaPredicted RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 MIA3Q5JRA6 1907 aa14.29□□□□□ -0.12
CLSTN3-205ENST00000535452 PIRO00625 290 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 CYP11A1P05108 521 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 PTPRZ1P23471 2315 aaPredicted RBP14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 DDX6P26196 483 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 CCR2P41597 374 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 RPL10AP62906 217 aaKnown RBP14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 LMNB2Q03252 620 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 TRIP11Q15643 1979 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 ZNF720Q7Z2F6 126 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 RALGPS2Q86X27 583 aaPredicted RBP14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 FSIP1Q8NA03 581 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 BPIFB1Q8TDL5 484 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 ANKRD36BP1Q96IX9 119 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 EPSTI1Q96J88 318 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 ZSWIM3Q96MP5 696 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 FAM213AQ9BRX8 229 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 ZCWPW1Q9H0M4 648 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 CHRDQ9H2X0 955 aa14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 RBAKQ9NYW8 714 aaPredicted RBP14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 SMG5Q9UPR3 1016 aaKnown RBP14.28□□□□□ -0.12
CLSTN3-205ENST00000535452 SLC38A8A6NNN8 435 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 TNNC2P02585 160 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 ADRB2P07550 413 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 CSH1P0DML2 217 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 CSH2P0DML3 217 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 PDIA4P13667 645 aaKnown RBP14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 GARTP22102 1010 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 FCARP24071 287 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 PDE6CP51160 858 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 MTAPQ13126 283 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 L1TD1Q5T7N2 865 aaKnown RBP14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 PRR23BQ6ZRT6 265 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 TMEM86AQ8N2M4 240 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 CELF5Q8N6W0 485 aaKnown RBP14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 ZNF396Q96N95 335 aaPredicted RBP14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 HAPLN2Q9GZV7 340 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 KIF9Q9HAQ2 790 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 PANK4Q9NVE7 773 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 EHD2Q9NZN4 543 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 TBC1D7Q9P0N9 293 aa14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 CDV3Q9UKY7 258 aaKnown RBP14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 MAGED2Q9UNF1 606 aaPredicted RBP14.27□□□□□ -0.13
CLSTN3-205ENST00000535452 ANO9A1A5B4 782 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 ANKRD63C9JTQ0 380 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 FOXD2O60548 495 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 ATG13O75143 517 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 PRPF40AO75400 957 aaKnown RBP14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 CD2BP2O95400 341 aaKnown RBP14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 PCSK1P29120 753 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 CNR2P34972 360 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 LHX1P48742 406 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 RBP5P82980 135 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 SPATA2LQ8IUW3 424 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 SYNPOQ8N3V7 929 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 CSGALNACT2Q8N6G5 542 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 CCDC26Q8TAB7 109 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 PRMT8Q9NR22 394 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 OLFML3Q9NRN5 406 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 ITGA11Q9UKX5 1188 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 AGAP1Q9UPQ3 857 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 CLIC4Q9Y696 253 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 STYXL1Q9Y6J8 313 aa14.26□□□□□ -0.13
CLSTN3-205ENST00000535452 SOBPA7XYQ1 873 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms