RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 KIF12Q96FN5 646 aa18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 TWNKQ96RR1 684 aa18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 APBA2Q99767 749 aa18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 EIF2AQ9BY44 585 aaKnown RBP18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 PARVAQ9NVD7 372 aa18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 GJD2Q9UKL4 321 aa18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 UTP11Q9Y3A2 253 aaKnown RBP18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 HES2Q9Y543 173 aa18.35■□□□□ 0.53
PCDHA6-202ENST00000527624 MBLAC1A4D2B0 266 aaPredicted RBP18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 PHF2O75151 1096 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 KRT14P02533 472 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 SLC10A3P09131 477 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 SLC1A1P43005 524 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 RAD23BP54727 409 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 CYP4A22Q5TCH4 519 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 FOXR1Q6PIV2 292 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 AP5M1Q9H0R1 490 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 DPP3Q9NY33 737 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 SNTG2Q9NY99 539 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 TULP2O00295 520 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 TREHO43280 583 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 HSPA6P17066 643 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 CTGFP29279 349 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 GJC1P36383 396 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 GRM5P41594 1212 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 SSR1P43307 286 aaKnown RBP18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 CPT1AP50416 773 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 PPP1R2P3Q6NXS1 205 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 TTC27Q6P3X3 843 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 CD302Q8IX05 232 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 FEZF2Q8TBJ5 459 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 ZFYVE28Q9HCC9 887 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 RNF19AQ9NV58 838 aa18.34■□□□□ 0.53
PCDHA6-202ENST00000527624 SMIM35A0A1B0GVV1 85 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 CALB1P05937 261 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 RARAP10276 462 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 HSPA9P38646 679 aaKnown RBP18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 TAS2R40P59535 323 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 PPP2R5EQ16537 467 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 DCAF4L1Q3SXM0 396 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 TMEM40Q8WWA1 233 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 MCEEQ96PE7 176 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 PCDHGC3Q9UN70 934 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 C2CD2Q9Y426 696 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 CEP83Q9Y592 693 aa18.33■□□□□ 0.53
PCDHA6-202ENST00000527624 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 ATICP31939 592 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 SIX1Q15475 284 aaPredicted RBP18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 DNAJC24Q6P3W2 148 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 SLC27A1Q6PCB7 646 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 ERICH1Q86X53 443 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 JAMLQ86YT9 394 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 SLC4A11Q8NBS3 891 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 DDX27Q96GQ7 796 aaKnown RBP18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 ITGA11Q9UKX5 1188 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 MTUS1Q9ULD2 1270 aa18.33■□□□□ 0.52
PCDHA6-202ENST00000527624 TRPM7Q96QT4 1865 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 CHRNA3P32297 505 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 IRAK1P51617 712 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 RBP5P82980 135 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 IRF5Q13568 498 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 DPH6Q7L8W6 267 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 SOCS4Q8WXH5 440 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 APOL6Q9BWW8 343 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 CAPS2Q9BXY5 557 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 TJP2Q9UDY2 1190 aa18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.32■□□□□ 0.52
PCDHA6-202ENST00000527624 HAS3O00219 553 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 CILPO75339 1184 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 ADAM17P78536 824 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 DHX34Q14147 1143 aaKnown RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 FSCN1Q16658 493 aaKnown RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 GLRA4Q5JXX5 417 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 CCDC137Q6PK04 289 aaKnown RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 SEC14L1Q92503 715 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 ZMAT2Q96NC0 199 aaKnown RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 HERPUD2Q9BSE4 406 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 PLVAPQ9BX97 442 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 ZNF518BQ9C0D4 1074 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 RAB17Q9H0T7 212 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 CYTH4Q9UIA0 394 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 TMEM191CA6NGB0 347 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 FAM155AB1AL88 458 aaPredicted RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 MED7O43513 233 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 P4HA1P13674 534 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 TCF4P15884 667 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 CDH5P33151 784 aaPredicted RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 FLT3P36888 993 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 SKOR1P84550 965 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 PTPN11Q06124 597 aaPredicted RBP18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 NOTUMQ6P988 496 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 DCUN1D2Q6PH85 259 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 CCDC50Q8IVM0 306 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 C1orf54Q8WWF1 131 aa18.31■□□□□ 0.52
PCDHA6-202ENST00000527624 ERP44Q9BS26 406 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms