RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NCANO14594 1321 aa11.27□□□□□ -0.61
PRPF40B-204ENST00000527253 F5P12259 2224 aa11.27□□□□□ -0.61
PRPF40B-204ENST00000527253 RIF1Q5UIP0 2472 aaKnown RBP11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 STK25O00506 426 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ZNF197O14709 1029 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 LDHAP00338 332 aaKnown RBP11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ITGB3P05106 788 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 GLULP15104 373 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 VIPR2P41587 438 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 STARD6P59095 220 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 CUL4BQ13620 913 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 TEAD2Q15562 447 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 SLC39A12Q504Y0 691 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 SLC44A4Q53GD3 710 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 CYP4A22Q5TCH4 519 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ATL3Q6DD88 541 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 IQCEQ6IPM2 695 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 PHLDB3Q6NSJ2 640 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ARMCX5Q6P1M9 558 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 UNC13DQ70J99 1090 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 GPD1LQ8N335 351 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 NOC3LQ8WTT2 800 aaKnown RBP11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 SCFD1Q8WVM8 642 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ELSPBP1Q96BH3 223 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 RSPRY1Q96DX4 576 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ASB16Q96NS5 453 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 ASAH2Q9NR71 780 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 SERTAD1Q9UHV2 236 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 L1RE1Q9UN81 338 aa11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 MTF2Q9Y483 593 aaPredicted RBP11.26□□□□□ -0.61
PRPF40B-204ENST00000527253 CACNA1IQ9P0X4 2223 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 PTPRZ1P23471 2315 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 A0A1W2PRU2 124 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 CLIC2O15247 247 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 EIF3DO15371 548 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 HCRTO43612 131 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 ACTN4O43707 911 aaKnown RBP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 KLRC4O43908 158 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 DCNP07585 359 aaKnown RBP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 ATF6P18850 670 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 AFMP43652 599 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 EPHB3P54753 998 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 AMPD3Q01432 767 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 GRM2Q14416 872 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 CCDC142Q17RM4 750 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 SV2CQ496J9 727 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 FAM26FQ5R3K3 315 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 GAREM2Q75VX8 874 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 DNAJB7Q7Z6W7 309 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 OSTM1Q86WC4 334 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 METTL23Q86XA0 190 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 NELFCDQ8IXH7 590 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 ELMOD1Q8N336 334 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 PDCL2Q8N4E4 241 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 CSGALNACT2Q8N6G5 542 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 CACTINQ8WUQ7 758 aaKnown RBP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 LPIN3Q9BQK8 851 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 MKNK1Q9BUB5 465 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 DDX23Q9BUQ8 820 aaKnown RBP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 MTMR12Q9C0I1 747 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 GZF1Q9H116 711 aaPredicted RBP11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 AGPAT3Q9NRZ7 376 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 INTS13Q9NVM9 706 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 HSPBP1Q9NZL4 362 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 DSEQ9UL01 958 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 CFAP45Q9UL16 551 aa11.25□□□□□ -0.61
PRPF40B-204ENST00000527253 PVALEFA0A1B0GWK0 134 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 ZNF233A6NK53 670 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 HAPLN1P10915 354 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 CD72P21854 359 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 PNPLA4P41247 253 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 ALDH1A3P47895 512 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 RBP5P82980 135 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 BFSP1Q12934 665 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 PLD1Q13393 1074 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 MLF2Q15773 248 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 VITQ6UXI7 678 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 LIMS2Q7Z4I7 341 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 THEM5Q8N1Q8 247 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 LRRC52Q8N7C0 313 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 LEMD2Q8NC56 503 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 ZSCAN18Q8TBC5 510 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 LEO1Q8WVC0 666 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 PSMG2Q969U7 264 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 PAGE5Q96GU1 130 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 ZNF560Q96MR9 790 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 LRRC3BQ96PB8 259 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 PKMYT1Q99640 499 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 SEPT5Q99719 369 aaPredicted RBP11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 MAGEF1Q9HAY2 307 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 TRPV4Q9HBA0 871 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 IL21Q9HBE4 155 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 ZFP14Q9HCL3 533 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
PRPF40B-204ENST00000527253 FAM13BQ9NYF5 915 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms