RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 RNF181Q9P0P0 153 aa4.15□□□□□ -1.75
LINCR-0001-203ENST00000524047 TUBD1Q9UJT1 453 aa4.15□□□□□ -1.75
LINCR-0001-203ENST00000524047 NUDCQ9Y266 331 aa4.15□□□□□ -1.75
LINCR-0001-203ENST00000524047 KNSTRNQ9Y448 316 aa4.15□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCDHA13Q9Y5I0 950 aa4.15□□□□□ -1.75
LINCR-0001-203ENST00000524047 EPN1Q9Y6I3 576 aaPredicted RBP4.15□□□□□ -1.75
LINCR-0001-203ENST00000524047 ADGRF5Q8IZF2 1346 aa4.15□□□□□ -1.75
LINCR-0001-203ENST00000524047 SHPRHQ149N8 1683 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 A0A1B0GTW7 788 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 PIPSLA2A3N6 862 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 CDKL5O76039 1030 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 SPDEFO95238 335 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 CFIP05156 583 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 ALAS1P13196 640 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 TYRP1P17643 537 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 HSD11B2P80365 405 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 TP53BP2Q13625 1128 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 ATP2B3Q16720 1220 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 SPDYE7PQ495Y7 208 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 CYB5RLQ6IPT4 315 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 SEM1Q6ZVN7 128 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 PNMA8AQ86V59 439 aaPredicted RBP4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 FAM43AQ8N2R8 423 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 CAVIN3Q969G5 261 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 HDAC10Q969S8 669 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 RNF31Q96EP0 1072 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 TMX3Q96JJ7 454 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 PUS7Q96PZ0 661 aaKnown RBP4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 SMAD5Q99717 465 aaKnown RBP4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 ADAM2Q99965 735 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 RNPEPQ9H4A4 650 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 ADARB2Q9NS39 739 aaKnown RBP4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 USP25Q9UHP3 1055 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 NAP1L2Q9ULW6 460 aaPredicted RBP4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 NOP58Q9Y2X3 529 aaKnown RBP4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 NOX1Q9Y5S8 564 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 RNF123Q5XPI4 1314 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 CENPJQ9HC77 1338 aaPredicted RBP4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 AATKQ6ZMQ8 1374 aa4.14□□□□□ -1.75
LINCR-0001-203ENST00000524047 SHTN1A0MZ66 631 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 CDHR4A6H8M9 788 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 MARCH11A6NNE9 402 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 GABRDO14764 452 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCDHGA12O60330 932 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ERN1O75460 977 aaKnown RBP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PRSS23O95084 383 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ELANEP08246 267 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 HKR1P10072 659 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ITGAMP11215 1152 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 FGFR4P22455 802 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 GCSHP23434 173 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 SEC24CP53992 1094 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 KIF23Q02241 960 aaPredicted RBP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 OCA2Q04671 838 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 CALD1Q05682 793 aaKnown RBP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCBP2Q15366 365 aaKnown RBP eCLIP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PRR16Q569H4 304 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 CC2D1BQ5T0F9 858 aaKnown RBP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ABHD17BQ5VST6 288 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ASB10Q8WXI3 467 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 TEKT5Q96M29 485 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ALOXE3Q9BYJ1 711 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PRDM13Q9H4Q3 707 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 GSTO2Q9H4Y5 243 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 TESQ9UGI8 421 aaKnown RBP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCDHGA9Q9Y5G4 932 aaKnown RBP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCDHGA8Q9Y5G5 932 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCDHGA7Q9Y5G6 932 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCDHGA6Q9Y5G7 932 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 PCDHGA3Q9Y5H0 932 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 COL4A3BPQ9Y5P4 624 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ARHGEF17Q96PE2 2063 aaPredicted RBP4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ALKQ9UM73 1620 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 NINLQ9Y2I6 1382 aa4.13□□□□□ -1.75
LINCR-0001-203ENST00000524047 ITSN1Q15811 1721 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 UBR1Q8IWV7 1749 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 DLC1Q96QB1 1528 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 TULP4Q9NRJ4 1543 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 CCDC154A6NI56 674 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 ALG1L2C9J202 215 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 GPANK1O95872 356 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 FOSP01100 380 aaPredicted RBP4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 CKBP12277 381 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 NCLP19338 710 aaKnown RBP4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 CCND1P24385 295 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 WASP42768 502 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 ATP8B2P98198 1209 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 FOXI1Q12951 378 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 TARDBPQ13148 414 aaKnown RBP eCLIP4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 IL10RAQ13651 578 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 PTPN21Q16825 1174 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 ERCC6LQ2NKX8 1250 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 UAP1L1Q3KQV9 507 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 B3GNTL1Q67FW5 361 aaPredicted RBP4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 ARMC6Q6NXE6 501 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 FOXR2Q6PJQ5 311 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 RD3Q7Z3Z2 195 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 TMEM132CQ8N3T6 1108 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 SLC44A3Q8N4M1 653 aa4.12□□□□□ -1.75
LINCR-0001-203ENST00000524047 NGEFQ8N5V2 710 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms