RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 RTEL1Q9NZ71 1219 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 HSPBP1Q9NZL4 362 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 KCMF1Q9P0J7 381 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 RBPJLQ9UBG7 517 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 ADAMTS6Q9UKP5 1117 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 SYNPO2Q9UMS6 1093 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 L1RE1Q9UN81 338 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 WDR19Q8NEZ3 1342 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 IRS2Q9Y4H2 1338 aa5.48□□□□□ -1.53
CTNNA1-212ENST00000518919 MYO5AQ9Y4I1 1855 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 ABHD14A-ACY1A0A1B0GW23 586 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 FAM171A2A8MVW0 826 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 F5H423 210 aaPredicted RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 SH2B2O14492 632 aaPredicted RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 PPFIA4O75335 1185 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 PDIA3P30101 505 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 GSK3AP49840 483 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 AGFG1P52594 562 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 IL10RAQ13651 578 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 ALX1Q15699 326 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 IMMTQ16891 758 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 PRSS36Q5K4E3 855 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 MEX3CQ5U5Q3 659 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 PPP4R3AQ6IN85 833 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 FAM173BQ6P4H8 233 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 ZC3H14Q6PJT7 736 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 TMC5Q6UXY8 1006 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 CHST3Q7LGC8 479 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 PROSER1Q86XN7 944 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 ANKRD18AQ8IVF6 992 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 LCORLQ8N3X6 602 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 TMEM151AQ8N4L1 468 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 ABHD4Q8TB40 342 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 PAWRQ96IZ0 340 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 CCDC138Q96M89 665 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 TBCBQ99426 244 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 LLPHQ9BRT6 129 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 BTBD2Q9BX70 525 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 ARMT1Q9H993 441 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 RSAD1Q9HA92 442 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 NGRNQ9NPE2 291 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 SCOCQ9UIL1 159 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 WASF3Q9UPY6 502 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 YBX2Q9Y2T7 364 aaKnown RBP5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 NR2E3Q9Y5X4 410 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 CACNA1SQ13698 1873 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 PNPLA7Q6ZV29 1317 aa5.47□□□□□ -1.53
CTNNA1-212ENST00000518919 CARMIL3Q8ND23 1372 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 SYCE3A1L190 88 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 CFAP69A5D8W1 941 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 RASA4BC9J798 803 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 RASA4O43374 803 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 PRKAB2O43741 272 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 RPLP2P05387 115 aaKnown RBP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 SPINK2P20155 84 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 GYG1P46976 350 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 MAP2K6P52564 334 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 UBE2HP62256 183 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 MGAT5Q09328 741 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 MGAT2Q10469 447 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 MAP3K12Q12852 859 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 NFIXQ14938 502 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 POLD3Q15054 466 aaPredicted RBP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 NOMO1Q15155 1222 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 CR1LQ2VPA4 569 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 THEMIS2Q5TEJ8 643 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 SWSAP1Q6NVH7 229 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 NFXL1Q6ZNB6 911 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 CYB5R4Q7L1T6 521 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 BMP8AQ7Z5Y6 402 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 ADGRA1Q86SQ6 560 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 NBPF5PQ86XG9 351 aaPredicted RBP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 DTX1Q86Y01 620 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 RAB11FIP4Q86YS3 637 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 KRT78Q8N1N4 520 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 ANKRD42Q8N9B4 389 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 AGBL5Q8NDL9 886 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 MYRIPQ8NFW9 859 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 ZNF384Q8TF68 577 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 ZNF274Q96GC6 653 aaPredicted RBP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 CDK5RAP3Q96JB5 506 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 C7orf25Q9BPX7 421 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 SELENOOQ9BVL4 669 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 NYXQ9GZU5 481 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 UBA5Q9GZZ9 404 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 NUP62CLQ9H1M0 184 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 DLL4Q9NR61 685 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 RBM12Q9NTZ6 932 aaKnown RBP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 MBNL3Q9NUK0 354 aaKnown RBP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 TRPC5Q9UL62 973 aaPredicted RBP5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 CTNND2Q9UQB3 1225 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 MAST2Q6P0Q8 1798 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 ELP1O95163 1332 aa5.46□□□□□ -1.54
CTNNA1-212ENST00000518919 TAF1P21675 1872 aa5.45□□□□□ -1.54
CTNNA1-212ENST00000518919 UBR3Q6ZT12 1888 aa5.45□□□□□ -1.54
CTNNA1-212ENST00000518919 NID2Q14112 1375 aa5.45□□□□□ -1.54
CTNNA1-212ENST00000518919 KLF18A0A0U1RQI7 1052 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms