RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZMAT2Q96NC0 199 aaKnown RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 TWNKQ96RR1 684 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 ELOVL4Q9GZR5 314 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 CXCL16Q9H2A7 254 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 NXF3Q9H4D5 531 aaKnown RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 GPBP1L1Q9HC44 474 aaPredicted RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 PIN4Q9Y237 131 aaKnown RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 NR2E1Q9Y466 385 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 SEPT4O43236 478 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 RECQL4O94761 1208 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 PYGMP11217 842 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 CD19P15391 556 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 TNNT3P45378 269 aaPredicted RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 PAK2Q13177 524 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 GNASQ5JWF2 1037 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 MAATS1Q7Z4T9 603 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 FEZF2Q8TBJ5 459 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 CASKIN2Q8WXE0 1202 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 CAVIN3Q969G5 261 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 TMEM176AQ96HP8 235 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 TRIM6Q9C030 488 aaPredicted RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 HMGXB4Q9UGU5 601 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 GTF2IRD1Q9UHL9 959 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 LCMT1Q9UIC8 334 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 PCNTO95613 3336 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 A0A0U1RQG5 324 aaPredicted RBP15.86■□□□□ 0.13
VCAN-211ENST00000513984 TLR3O15455 904 aaKnown RBP15.86■□□□□ 0.13
VCAN-211ENST00000513984 CARSP49589 748 aaKnown RBP15.86■□□□□ 0.13
VCAN-211ENST00000513984 PRKCZQ05513 592 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 MYO1EQ12965 1108 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 NOGQ13253 232 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 NNTQ13423 1086 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 UBXN11Q5T124 520 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 DENND1BQ6P3S1 775 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 PAXIP1Q6ZW49 1069 aaPredicted RBP15.86■□□□□ 0.13
VCAN-211ENST00000513984 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.86■□□□□ 0.13
VCAN-211ENST00000513984 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.86■□□□□ 0.13
VCAN-211ENST00000513984 TSPAN18Q96SJ8 248 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 PLVAPQ9BX97 442 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 ERVK-5Q9HDB9 667 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.86■□□□□ 0.13
VCAN-211ENST00000513984 AMACRQ9UHK6 382 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 HPCAL4Q9UM19 191 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 BARX2Q9UMQ3 279 aaPredicted RBP15.86■□□□□ 0.13
VCAN-211ENST00000513984 HES2Q9Y543 173 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 THSD7BQ9C0I4 1608 aa15.86■□□□□ 0.13
VCAN-211ENST00000513984 ESYT3A0FGR9 886 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 PSTPIP1O43586 416 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 GSCP56915 257 aaPredicted RBP15.85■□□□□ 0.13
VCAN-211ENST00000513984 TAP1Q03518 808 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 XKR4Q5GH76 650 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 PPP1R15BQ5SWA1 713 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 ERICH1Q86X53 443 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 SLC13A5Q86YT5 568 aaPredicted RBP15.85■□□□□ 0.13
VCAN-211ENST00000513984 LRRC52Q8N7C0 313 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 BEST2Q8NFU1 509 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 SEC14L1Q92503 715 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 DDX27Q96GQ7 796 aaKnown RBP15.85■□□□□ 0.13
VCAN-211ENST00000513984 CELF4Q9BZC1 486 aaKnown RBP15.85■□□□□ 0.13
VCAN-211ENST00000513984 ACBD3Q9H3P7 528 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 SPC25Q9HBM1 224 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 IP6K2Q9UHH9 426 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 STRIP2Q9ULQ0 834 aa15.85■□□□□ 0.13
VCAN-211ENST00000513984 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.85■□□□□ 0.13
VCAN-211ENST00000513984 TMEM191CA6NGB0 347 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 PHF2O75151 1096 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 ADAMTS4O75173 837 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 PGK1P00558 417 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 RARBP10826 455 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 VDRP11473 427 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 GPS2Q13227 327 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 CUL1Q13616 776 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 CYP1B1Q16678 543 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 NBPF20Q3BBV1 942 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 PTPN20Q4JDL3 420 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 DNAJC24Q6P3W2 148 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 CXCL17Q6UXB2 119 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 SND1Q7KZF4 910 aaKnown RBP eCLIP15.84■□□□□ 0.137e-8■■■■□ 24.9
VCAN-211ENST00000513984 C3orf20Q8ND61 904 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 PLEKHA4Q9H4M7 779 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 TUBGCP4Q9UGJ1 667 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 UBQLN1Q9UMX0 589 aaKnown RBP15.84■□□□□ 0.13
VCAN-211ENST00000513984 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.84■□□□□ 0.13
VCAN-211ENST00000513984 TTI1O43156 1089 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 HMGCRP04035 888 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 KCNE1P15382 129 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 NDST1P52848 882 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 RPL7AP62424 266 aaKnown RBP15.84■□□□□ 0.13
VCAN-211ENST00000513984 MRPS6P82932 125 aaKnown RBP15.84■□□□□ 0.13
VCAN-211ENST00000513984 CACNB2Q08289 660 aaPredicted RBP15.84■□□□□ 0.13
VCAN-211ENST00000513984 TRIM32Q13049 653 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 ORC1Q13415 861 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 DHX34Q14147 1143 aaKnown RBP15.84■□□□□ 0.13
VCAN-211ENST00000513984 SIX1Q15475 284 aaPredicted RBP15.84■□□□□ 0.13
VCAN-211ENST00000513984 CNGA2Q16280 664 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 ADAT2Q7Z6V5 191 aaKnown RBP15.84■□□□□ 0.13
VCAN-211ENST00000513984 FAM228AQ86W67 206 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 ZDHHC14Q8IZN3 488 aa15.84■□□□□ 0.13
VCAN-211ENST00000513984 PRELID2Q8N945 189 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms