RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 HSPA4P34932 840 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 TXKP42681 527 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 EPHB3P54753 998 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 CYP4F8P98187 520 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 SEMA3BQ13214 749 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 NR5A1Q13285 461 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 DMC1Q14565 340 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 COL28A1Q2UY09 1125 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 PADI6Q6TGC4 694 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 TAS1R3Q7RTX0 852 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 RPLP0P6Q8NHW5 317 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 DEPTORQ8TB45 409 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 TNFRSF25Q93038 417 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 TMEM74BQ9NUR3 256 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 SLC38A7Q9NVC3 462 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 CNTN3Q9P232 1028 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 TBX20Q9UMR3 447 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 THADAQ6YHU6 1953 aa12.23□□□□□ -0.45
RNF4-218ENST00000513284 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
RNF4-218ENST00000513284 APBB3O95704 486 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 GBP1P32455 592 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 MCM4P33991 863 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 ALDH1A3P47895 512 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 MCM2P49736 904 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 CDR1P51861 262 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 DGKEP52429 567 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 SIM1P81133 766 aaPredicted RBP12.22□□□□□ -0.45
RNF4-218ENST00000513284 SLC10A6Q3KNW5 377 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 TMEM150AQ86TG1 271 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 ZNF274Q96GC6 653 aaPredicted RBP12.22□□□□□ -0.45
RNF4-218ENST00000513284 CCDC43Q96MW1 224 aaKnown RBP12.22□□□□□ -0.45
RNF4-218ENST00000513284 NAP1L4Q99733 375 aaKnown RBP12.22□□□□□ -0.45
RNF4-218ENST00000513284 LPIN3Q9BQK8 851 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 TMEM60Q9H2L4 133 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 THG1LQ9NWX6 298 aaKnown RBP12.22□□□□□ -0.45
RNF4-218ENST00000513284 ASB3Q9Y575 518 aa12.22□□□□□ -0.45
RNF4-218ENST00000513284 MTMR11A4FU01 709 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 K7ERI5 159 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 CPLX1O14810 134 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 DRD1P21728 446 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 PROZP22891 400 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 GJA4P35212 333 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 AARSP49588 968 aaKnown RBP eCLIP12.21□□□□□ -0.45
RNF4-218ENST00000513284 EFNA5P52803 228 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 YARSP54577 528 aaKnown RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 YWHAHQ04917 246 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 SCAPQ12770 1279 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 PLD1Q13393 1074 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 KARSQ15046 597 aaKnown RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 PTPAQ15257 358 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 ZBTB6Q15916 424 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 CALCRLQ16602 461 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 RAB44Q7Z6P3 723 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 CMTM8Q8IZV2 173 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 FRMD1Q8N878 549 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 PIGKQ92643 395 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 USP13Q92995 863 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 ZBTB45Q96K62 511 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 ACAP3Q96P50 834 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 NACC1Q96RE7 527 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 TARS2Q9BW92 718 aaKnown RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 TPSD1Q9BZJ3 242 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 TOPORSQ9NS56 1045 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 TUBGCP4Q9UGJ1 667 aa12.21□□□□□ -0.45
RNF4-218ENST00000513284 EVLQ9UI08 416 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 MBD1Q9UIS9 605 aaPredicted RBP12.21□□□□□ -0.45
RNF4-218ENST00000513284 UPK3BL1B0FP48 263 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 UPK3BL2E5RIL1 263 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 LARGE1O95461 756 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 HNRNPLP14866 589 aaKnown RBP eCLIP12.2□□□□□ -0.46
RNF4-218ENST00000513284 ATF6P18850 670 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 MAPK8P45983 427 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 STK3Q13188 491 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 ECM1Q16610 540 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 SEZ6Q53EL9 994 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 USP39Q53GS9 565 aaKnown RBP12.2□□□□□ -0.46
RNF4-218ENST00000513284 CYP2U1Q7Z449 544 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 RASSF3Q86WH2 238 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 P2RY13Q9BPV8 354 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 FSCN3Q9NQT6 498 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 DAXXQ9UER7 740 aaPredicted RBP12.2□□□□□ -0.46
RNF4-218ENST00000513284 GON4LQ3T8J9 2241 aa12.2□□□□□ -0.46
RNF4-218ENST00000513284 PTPRDP23468 1912 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 OR6C75A6NL08 312 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 F11P03951 625 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 ENGP17813 658 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 XBP1P17861 261 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 DHPSP49366 369 aaPredicted RBP12.19□□□□□ -0.46
RNF4-218ENST00000513284 SPAG1Q07617 926 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 ZNF568Q3ZCX4 644 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 FBXO43Q4G163 708 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 ARHGAP15Q53QZ3 475 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 TRIM61Q5EBN2 209 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 RUFY3Q7L099 469 aa12.19□□□□□ -0.46
RNF4-218ENST00000513284 OLIG1Q8TAK6 271 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms