RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 HSPH1Q92598 858 aa5.18□□□□□ -1.58
PTPN13-209ENST00000511467 VPS33AQ96AX1 596 aa5.18□□□□□ -1.58
PTPN13-209ENST00000511467 TMEM106CQ9BVX2 250 aa5.18□□□□□ -1.58
PTPN13-209ENST00000511467 WWP1Q9H0M0 922 aa5.18□□□□□ -1.58
PTPN13-209ENST00000511467 PARVBQ9HBI1 364 aa5.18□□□□□ -1.58
PTPN13-209ENST00000511467 USH1GQ495M9 461 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ISM2Q6H9L7 571 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ALKBH5Q6P6C2 394 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PADI6Q6TGC4 694 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 NSUN4Q96CB9 384 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 KLF6Q99612 283 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PAIP2Q9BPZ3 127 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 SPINK5Q9NQ38 1064 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TTC7AQ9ULT0 858 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PIPSLA2A3N6 862 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 E9PMD0 336 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 SNX2O60749 519 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 COBLO75128 1261 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 MT-ND3P03897 115 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CYP3A4P08684 503 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CYP21A2P08686 494 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 RAG1P15918 1043 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 YWHABP31946 246 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TTKP33981 857 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 DPP6P42658 865 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 NDUFA8P51970 172 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ART3Q13508 389 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 FAM189A2Q15884 450 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 NANOGNBQ7Z5D8 188 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 MB21D2Q8IYB1 491 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 GPC2Q8N158 579 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 SYNE4Q8N205 404 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ATP6V0D2Q8N8Y2 350 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 FAM167BQ9BTA0 163 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 YIPF3Q9GZM5 350 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 KIAA1683Q9H0B3 1180 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 AGO2Q9UKV8 859 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TAF4O00268 1085 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PDE2AO00408 941 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PTGS1P23219 599 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 INPP5AQ14642 412 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 POLD3Q15054 466 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 HIF1AQ16665 826 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TYW1BQ6NUM6 668 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 BHLHB9Q6PI77 547 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 RASEFQ8IZ41 740 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF398Q8TD17 642 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ACMSDQ8TDX5 336 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CASKIN2Q8WXE0 1202 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 RMND5BQ96G75 393 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 QRFPRQ96P65 431 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CDH19Q9H159 772 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 RBAKQ9NYW8 714 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 H7C0C1 242 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 MAGEC1O60732 1142 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ATP4AP20648 1035 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ATP5OP48047 213 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 HARS2P49590 506 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ZKSCAN8Q15776 578 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 IZUMO3Q5VZ72 239 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TRMT11Q7Z4G4 463 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 DNAAF3Q8N9W5 541 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 HELQQ8TDG4 1101 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CPLX3Q8WVH0 158 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 IFT43Q96FT9 208 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ABHD16BQ9H3Z7 469 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 VPS18Q9P253 973 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 UBQLN1Q9UMX0 589 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 FRMPD3Q5JV73 1810 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ZNF236Q9UL36 1845 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ARHGEF17Q96PE2 2063 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 FAM186AA6NE01 2351 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 IRGMA1A4Y4 181 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 C3orf70A6NLC5 250 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 EIF2S1P05198 315 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 MAP4P27816 1152 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 MCAMP43121 646 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 NPY2RP49146 381 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 BCAMP50895 628 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 RPS6KA3P51812 740 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ANO5Q75V66 913 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 SLC30A8Q8IWU4 369 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 CPXCR1Q8N123 301 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 KCTD13Q8WZ19 329 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ARHGEF1Q92888 912 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ARHGEF2Q92974 986 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 GLT1D1Q96MS3 346 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 DCDC2Q9UHG0 476 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PCDHA13Q9Y5I0 950 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 FHOD1Q9Y613 1164 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 ACTL7BQ9Y614 415 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TRDMT1O14717 391 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 SUPT3HO75486 399 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 SEMA3DO95025 777 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 RFC2P35250 354 aa5.17□□□□□ -1.58
PTPN13-209ENST00000511467 TUFMP49411 452 aaKnown RBP5.17□□□□□ -1.58
PTPN13-209ENST00000511467 PSMD7P51665 324 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms