RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 PIN4Q9Y237 131 aaKnown RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 GINS2Q9Y248 185 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 UTP11Q9Y3A2 253 aaKnown RBP8.34□□□□□ -1.07
SSBP2-213ENST00000509743 DOCK5Q9H7D0 1870 aa8.34□□□□□ -1.07
SSBP2-213ENST00000509743 FAM170AA1A519 330 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 TMEM191CA6NGB0 347 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SEPT4O43236 478 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 TREHO43280 583 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 RECQL4O94761 1208 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 ECM2O94769 699 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 CFHP08603 1231 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 C6orf222P0C671 652 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 RARBP10826 455 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 PYGMP11217 842 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 ITGA4P13612 1032 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 KCNE1P15382 129 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 CYP3A5P20815 502 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 FNTAP49354 379 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 MRPS6P82932 125 aaKnown RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 PIGHQ14442 188 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 ZBTB6Q15916 424 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 CNGA2Q16280 664 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 CYP1B1Q16678 543 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 ZNF394Q53GI3 561 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SGO2Q562F6 1265 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 LRRC38Q5VT99 294 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 ALS2CLQ60I27 953 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SCARA3Q6AZY7 606 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 DENND1BQ6P3S1 775 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 DCUN1D2Q6PH85 259 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SND1Q7KZF4 910 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SLC13A5Q86YT5 568 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 GSPT2Q8IYD1 628 aaKnown RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 KATNAL2Q8IYT4 538 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 HACE1Q8IYU2 909 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 MREGQ8N565 214 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 GOLGA6L1Q8N7Z2 621 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 NIPA2Q8N8Q9 360 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SLC4A11Q8NBS3 891 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 FAM71BQ8TC56 605 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 CASKIN2Q8WXE0 1202 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 TFAP2BQ92481 460 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SEC14L1Q92503 715 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 TRIB2Q92519 343 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 PKNOX2Q96KN3 472 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 ZNF560Q96MR9 790 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 NT5C1AQ9BXI3 368 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 EIF2AQ9BY44 585 aaKnown RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 CELF4Q9BZC1 486 aaKnown RBP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 FAM129AQ9BZQ8 928 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SDCBP2Q9H190 292 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 CDHR5Q9HBB8 845 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 SNTG2Q9NY99 539 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSBP2-213ENST00000509743 TRPV2Q9Y5S1 764 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 MYH11P35749 1972 aa8.33□□□□□ -1.08
SSBP2-213ENST00000509743 TCRBV5S1A1TA0A578 114 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 O00370 1275 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 PODXLO00592 558 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 FSCN2O14926 492 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 MICAL2O94851 1124 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 SETSIPP0DME0 302 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 CTGFP29279 349 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 OAS2P29728 719 aaKnown RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 RAP1GAPP47736 663 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 CARSP49589 748 aaKnown RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 FLT3LGP49771 235 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 CDH8P55286 799 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 SNX16P57768 344 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 HIC1Q14526 733 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 HLTFQ14527 1009 aaKnown RBP eCLIP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 ZNF268Q14587 947 aaPredicted RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 XKR4Q5GH76 650 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 GNASQ5JWF2 1037 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 PPP1R15BQ5SWA1 713 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 ALKAL1Q6UXT8 129 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 SYDE1Q6ZW31 735 aaPredicted RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 PAXIP1Q6ZW49 1069 aaPredicted RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 RPAINQ86UA6 219 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 SESTD1Q86VW0 696 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 UNC93AQ86WB7 457 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 WDTC1Q8N5D0 677 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 EXD1Q8NHP7 514 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 IPO4Q8TEX9 1081 aaKnown RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 FNIP1Q8TF40 1166 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 IFT81Q8WYA0 676 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 MAGOHBQ96A72 148 aaKnown RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 LRRC45Q96CN5 670 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 DDX27Q96GQ7 796 aaKnown RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 RBM41Q96IZ5 413 aaKnown RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 ELOVL4Q9GZR5 314 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 NXF3Q9H4D5 531 aaKnown RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 SYNCQ9H7C4 482 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 GPBP1L1Q9HC44 474 aaPredicted RBP8.32□□□□□ -1.08
SSBP2-213ENST00000509743 CHST12Q9NRB3 414 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 HOMER3Q9NSC5 361 aa8.32□□□□□ -1.08
SSBP2-213ENST00000509743 DDX56Q9NY93 547 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms