RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ATOH1Q92858 354 aaPredicted RBP19.35■□□□□ 0.69
TPM3-220ENST00000509601 IRF2BPLQ9H1B7 796 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 MAGEF1Q9HAY2 307 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 FAM13BQ9NYF5 915 aa19.35■□□□□ 0.69
TPM3-220ENST00000509601 EIF3DO15371 548 aaKnown RBP eCLIP19.34■□□□□ 0.69
TPM3-220ENST00000509601 SOAT2O75908 522 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 ITGB3P05106 788 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 POLR2BP30876 1174 aaKnown RBP19.34■□□□□ 0.69
TPM3-220ENST00000509601 ALDH1A3P47895 512 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 CDR1P51861 262 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 EPHB3P54753 998 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 SNW1Q13573 536 aaKnown RBP19.34■□□□□ 0.69
TPM3-220ENST00000509601 CUL4BQ13620 913 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 SV2CQ496J9 727 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 SLC39A12Q504Y0 691 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 FAM26FQ5R3K3 315 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 STXBP4Q6ZWJ1 553 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 DNAJB7Q7Z6W7 309 aaPredicted RBP19.34■□□□□ 0.69
TPM3-220ENST00000509601 METTL23Q86XA0 190 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 CBWD2Q8IUF1 395 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 CCDC105Q8IYK2 499 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 THEM5Q8N1Q8 247 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 DTWD2Q8NBA8 298 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 SHKBP1Q8TBC3 707 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 ELSPBP1Q96BH3 223 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 ASB16Q96NS5 453 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 ASAH2Q9NR71 780 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 DLGAP2Q9P1A6 1054 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 HSFX1Q9UBD0 423 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 SERTAD1Q9UHV2 236 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 SIX4Q9UIU6 781 aa19.34■□□□□ 0.69
TPM3-220ENST00000509601 PVALEFA0A1B0GWK0 134 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 ZNF233A6NK53 670 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 TULP1O00294 542 aaPredicted RBP19.33■□□□□ 0.68
TPM3-220ENST00000509601 PNPLA4P41247 253 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 AFMP43652 599 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 PLD1Q13393 1074 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 TEAD2Q15562 447 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 LMBRD2Q68DH5 695 aaPredicted RBP19.33■□□□□ 0.68
TPM3-220ENST00000509601 GRAMD1CQ8IYS0 662 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 OR5B17Q8NGF7 314 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 NOC3LQ8WTT2 800 aaKnown RBP19.33■□□□□ 0.68
TPM3-220ENST00000509601 DDX23Q9BUQ8 820 aaKnown RBP19.33■□□□□ 0.68
TPM3-220ENST00000509601 INTS13Q9NVM9 706 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 HSPBP1Q9NZL4 362 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 L1RE1Q9UN81 338 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 ASB3Q9Y575 518 aa19.33■□□□□ 0.68
TPM3-220ENST00000509601 PTPRJQ12913 1337 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 ZFHX2Q9C0A1 2572 aaPredicted RBP19.32■□□□□ 0.68
TPM3-220ENST00000509601 KLRC4O43908 158 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 RBP5P82980 135 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 PDCL2Q8N4E4 241 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 LRRC52Q8N7C0 313 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 SMARCD2Q92925 531 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 PSMG2Q969U7 264 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 ZNF560Q96MR9 790 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 ZFP14Q9HCL3 533 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 ZNF334Q9HCZ1 680 aaPredicted RBP19.32■□□□□ 0.68
TPM3-220ENST00000509601 SLC39A2Q9NP94 309 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 AGPAT3Q9NRZ7 376 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 TMLHEQ9NVH6 421 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 GDAP2Q9NXN4 497 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 ITGA11Q9UKX5 1188 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 SIT1Q9Y3P8 196 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 TSC2P49815 1807 aa19.32■□□□□ 0.68
TPM3-220ENST00000509601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.31■□□□□ 0.68
TPM3-220ENST00000509601 CLIC2O15247 247 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 ACTN4O43707 911 aaKnown RBP19.31■□□□□ 0.68
TPM3-220ENST00000509601 DCNP07585 359 aaKnown RBP19.31■□□□□ 0.68
TPM3-220ENST00000509601 SLFN14P0C7P3 912 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 GLULP15104 373 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 CMA1P23946 247 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 VIPR2P41587 438 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 TUFMP49411 452 aaKnown RBP19.31■□□□□ 0.68
TPM3-220ENST00000509601 PFKPQ01813 784 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 PRKCQQ04759 706 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 MLF2Q15773 248 aaPredicted RBP19.31■□□□□ 0.68
TPM3-220ENST00000509601 GAREM2Q75VX8 874 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 NELFCDQ8IXH7 590 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 LEO1Q8WVC0 666 aaPredicted RBP19.31■□□□□ 0.68
TPM3-220ENST00000509601 PAGE5Q96GU1 130 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 SHDQ96IW2 340 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 FOXQ1Q9C009 403 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 MTMR12Q9C0I1 747 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 TRPV4Q9HBA0 871 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 KIAA1586Q9HCI6 787 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 TCHHQ07283 1943 aa19.31■□□□□ 0.68
TPM3-220ENST00000509601 COL4A3Q01955 1670 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 A0A1B0GVL5 298 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 A0A1W2PRU2 124 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 SHISA7A6NL88 538 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 LRRN2O75325 713 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 KRT19P08727 400 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 HAPLN1P10915 354 aaPredicted RBP19.3■□□□□ 0.68
TPM3-220ENST00000509601 ATF6P18850 670 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 SNRPFP62306 86 aaKnown RBP19.3■□□□□ 0.68
TPM3-220ENST00000509601 SMARCB1Q12824 385 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 SURF1Q15526 300 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 BMT2Q1RMZ1 405 aa19.3■□□□□ 0.68
TPM3-220ENST00000509601 VITQ6UXI7 678 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms