RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 PSMG2Q969U7 264 aa14.93□□□□□ -0.02
HMGCR-208ENST00000509431 DCBLD2Q96PD2 775 aa14.93□□□□□ -0.02
HMGCR-208ENST00000509431 POLR3CQ9BUI4 534 aaPredicted RBP14.93□□□□□ -0.02
HMGCR-208ENST00000509431 ZSWIM4Q9H7M6 989 aa14.93□□□□□ -0.02
HMGCR-208ENST00000509431 KIF9Q9HAQ2 790 aa14.93□□□□□ -0.02
HMGCR-208ENST00000509431 SLC38A7Q9NVC3 462 aa14.93□□□□□ -0.02
HMGCR-208ENST00000509431 NUB1Q9Y5A7 615 aa14.93□□□□□ -0.02
HMGCR-208ENST00000509431 ATXN2Q99700 1313 aaKnown RBP14.92□□□□□ -0.02
HMGCR-208ENST00000509431 PODXLO00592 558 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 GJB3O75712 270 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 ITPKAP23677 461 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 CDC25CP30307 473 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 GJA4P35212 333 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 SRSF1Q07955 248 aaKnown RBP eCLIP14.92□□□□□ -0.02
HMGCR-208ENST00000509431 PDGFRLQ15198 375 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 DCAF4L1Q3SXM0 396 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 TRIM68Q6AZZ1 485 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 CC2D1AQ6P1N0 951 aaPredicted RBP14.92□□□□□ -0.02
HMGCR-208ENST00000509431 LRRC69Q6ZNQ3 347 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 DNAJB7Q7Z6W7 309 aaPredicted RBP14.92□□□□□ -0.02
HMGCR-208ENST00000509431 SLCO6A1Q86UG4 719 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 NOSTRINQ8IVI9 506 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 ZBTB8OSQ8IWT0 167 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 CPA6Q8N4T0 437 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
HMGCR-208ENST00000509431 USP33Q8TEY7 942 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 SUSD3Q96L08 255 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 GCNAQ96QF7 691 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
HMGCR-208ENST00000509431 FZD8Q9H461 694 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 GOLGA2P5Q9HBQ8 144 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 FSCN3Q9NQT6 498 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 MMP17Q9ULZ9 603 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 GDAQ9Y2T3 454 aa14.92□□□□□ -0.02
HMGCR-208ENST00000509431 USP9XQ93008 2570 aaPredicted RBP14.92□□□□□ -0.02
HMGCR-208ENST00000509431 CCDC196A0A1B0GTZ2 297 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 LRRIQ4A6NIV6 560 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 SGSM2O43147 1006 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 AP5Z1O43299 807 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 TDP2O95551 362 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 NBR1Q14596 966 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 EPHA7Q15375 998 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 CRY1Q16526 586 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 SMC5Q8IY18 1101 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
HMGCR-208ENST00000509431 RLN3Q8WXF3 142 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 EZH1Q92800 747 aaPredicted RBP14.91□□□□□ -0.02
HMGCR-208ENST00000509431 FAM20AQ96MK3 541 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 FCRL3Q96P31 734 aaPredicted RBP14.91□□□□□ -0.02
HMGCR-208ENST00000509431 VAV3Q9UKW4 847 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 CIZ1Q9ULV3 898 aaPredicted RBP14.91□□□□□ -0.02
HMGCR-208ENST00000509431 PTPN13Q12923 2485 aa14.91□□□□□ -0.02
HMGCR-208ENST00000509431 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 ARSAP15289 507 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 CHMLP26374 656 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 CDC27P30260 824 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 RPL9P32969 192 aaKnown RBP14.9□□□□□ -0.02
HMGCR-208ENST00000509431 BFSP1Q12934 665 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 PRPF4BQ13523 1007 aaKnown RBP14.9□□□□□ -0.02
HMGCR-208ENST00000509431 CDCA2Q69YH5 1023 aaPredicted RBP14.9□□□□□ -0.02
HMGCR-208ENST00000509431 B4GALNT3Q6L9W6 998 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 APBB1IPQ7Z5R6 666 aaPredicted RBP14.9□□□□□ -0.02
HMGCR-208ENST00000509431 CMTM8Q8IZV2 173 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 DDX12PQ92771 950 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 C2orf40Q9H1Z8 148 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 KNTC1P50748 2209 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 DENND4CQ5VZ89 1909 aa14.9□□□□□ -0.02
HMGCR-208ENST00000509431 PRPF3O43395 683 aaKnown RBP14.89□□□□□ -0.03
HMGCR-208ENST00000509431 CBFA2T3O75081 653 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 U2AF2P26368 475 aaKnown RBP eCLIP14.89□□□□□ -0.032e-12■■□□□ 14.2
HMGCR-208ENST00000509431 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
HMGCR-208ENST00000509431 AVPR1AP37288 418 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 NUCB1Q02818 461 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 SOX4Q06945 474 aaPredicted RBP14.89□□□□□ -0.03
HMGCR-208ENST00000509431 DUSP4Q13115 394 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 CAMK2BQ13554 666 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 MAP7D1Q3KQU3 841 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 SLC36A4Q6YBV0 504 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 GPR155Q7Z3F1 870 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 TTC30AQ86WT1 665 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 OR2I1PQ8NGU4 316 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 SLC46A2Q9BY10 475 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 POLR3FQ9H1D9 316 aaPredicted RBP14.89□□□□□ -0.03
HMGCR-208ENST00000509431 ECT2Q9H8V3 914 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 TOPORSQ9NS56 1045 aaPredicted RBP14.89□□□□□ -0.03
HMGCR-208ENST00000509431 HSFX1Q9UBD0 423 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 DDX25Q9UHL0 483 aaKnown RBP14.89□□□□□ -0.03
HMGCR-208ENST00000509431 BRPF3Q9ULD4 1205 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 TSC2P49815 1807 aa14.89□□□□□ -0.03
HMGCR-208ENST00000509431 A0A1W2PQD8 194 aa14.88□□□□□ -0.03
HMGCR-208ENST00000509431 ZBTB39O15060 712 aa14.88□□□□□ -0.03
HMGCR-208ENST00000509431 DKK1O94907 266 aa14.88□□□□□ -0.03
HMGCR-208ENST00000509431 VNN2O95498 520 aa14.88□□□□□ -0.03
HMGCR-208ENST00000509431 DDX6P26196 483 aaKnown RBP eCLIP14.88□□□□□ -0.035e-7■■□□□ 11.4
HMGCR-208ENST00000509431 ITPKBP27987 946 aa14.88□□□□□ -0.03
HMGCR-208ENST00000509431 MCM4P33991 863 aa14.88□□□□□ -0.03
HMGCR-208ENST00000509431 YARSP54577 528 aaKnown RBP14.88□□□□□ -0.03
HMGCR-208ENST00000509431 MRPS21P82921 87 aaKnown RBP14.88□□□□□ -0.03
HMGCR-208ENST00000509431 CYP4F8P98187 520 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms