RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 SMYD3Q9H7B4 428 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 WDR6Q9NNW5 1121 aaKnown RBP12.48□□□□□ -0.41
SCMH1-217ENST00000498793 ZDHHC7Q9NXF8 308 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 CEP72Q9P209 647 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 ITGA11Q9UKX5 1188 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 HELZP42694 1942 aaKnown RBP12.48□□□□□ -0.41
SCMH1-217ENST00000498793 COL4A2P08572 1712 aa12.48□□□□□ -0.41
SCMH1-217ENST00000498793 MUC6Q6W4X9 2439 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 PDXKO00764 312 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 DCXO43602 365 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 NARSO43776 548 aaKnown RBP12.47□□□□□ -0.41
SCMH1-217ENST00000498793 PAPLNO95428 1278 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 PDGFBP01127 241 aaPredicted RBP12.47□□□□□ -0.41
SCMH1-217ENST00000498793 TNNC2P02585 160 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 MYL1P05976 194 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 NR2F2P24468 414 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 GBP2P32456 591 aaPredicted RBP12.47□□□□□ -0.41
SCMH1-217ENST00000498793 DUSP4Q13115 394 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 ORC1Q13415 861 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 SOWAHAQ2M3V2 549 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 C15orf39Q6ZRI6 1047 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 GUF1Q8N442 669 aaKnown RBP12.47□□□□□ -0.41
SCMH1-217ENST00000498793 ZNF461Q8TAF7 563 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 SPATA20Q8TB22 786 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 SMARCE1Q969G3 411 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 NECTIN4Q96NY8 510 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 PI4K2AQ9BTU6 479 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 RPP25Q9BUL9 199 aaKnown RBP12.47□□□□□ -0.41
SCMH1-217ENST00000498793 ZCWPW1Q9H0M4 648 aa12.47□□□□□ -0.41
SCMH1-217ENST00000498793 ZNF334Q9HCZ1 680 aaPredicted RBP12.47□□□□□ -0.41
SCMH1-217ENST00000498793 AFF4Q9UHB7 1163 aaKnown RBP12.47□□□□□ -0.41
SCMH1-217ENST00000498793 ARHGEF37A1IGU5 675 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 PI4K2BG5E9Z4 385 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 KIAA0391O15091 583 aaKnown RBP12.46□□□□□ -0.41
SCMH1-217ENST00000498793 KINO60870 393 aaKnown RBP12.46□□□□□ -0.41
SCMH1-217ENST00000498793 MOSPD3O75425 235 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 RHOP08100 348 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 ATF2P15336 505 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 ATF6P18850 670 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 FSHRP23945 695 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 LMO2P25791 158 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 RBP5P82980 135 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 POU5F1Q01860 360 aaKnown RBP12.46□□□□□ -0.41
SCMH1-217ENST00000498793 PPP3CAQ08209 521 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 BIRC3Q13489 604 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 DUOXA2Q1HG44 320 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 KLHL10Q6JEL2 608 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 SLC9A9Q8IVB4 645 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 ADGRF2Q8IZF7 708 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 HDAC7Q8WUI4 952 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
SCMH1-217ENST00000498793 FNBP1Q96RU3 617 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 TSPAN18Q96SJ8 248 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 PKMYT1Q99640 499 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 CORO1BQ9BR76 489 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 XYLT2Q9H1B5 865 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 DPEP3Q9H4B8 488 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 ABI2Q9NYB9 513 aaPredicted RBP12.46□□□□□ -0.41
SCMH1-217ENST00000498793 HMGXB4Q9UGU5 601 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 CTNND2Q9UQB3 1225 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 TRAF3IP3Q9Y228 551 aa12.46□□□□□ -0.41
SCMH1-217ENST00000498793 MIA3Q5JRA6 1907 aa12.46□□□□□ -0.42
SCMH1-217ENST00000498793 ATG2BQ96BY7 2078 aa12.46□□□□□ -0.42
SCMH1-217ENST00000498793 OR6C75A6NL08 312 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 CALUO43852 315 aaPredicted RBP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 LRG1P02750 347 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 C4BPAP04003 597 aaKnown RBP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 HNRNPA1P09651 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 ELF1P32519 619 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 GCLMP48507 274 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 CDH8P55286 799 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 STX17P56962 302 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 PTPN21Q16825 1174 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 PABPC1LQ4VXU2 614 aaKnown RBP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 STXBP5Q5T5C0 1151 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 IER5LQ5T953 404 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 ZNF658Q5TYW1 1059 aaPredicted RBP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 ANKRD40Q6AI12 368 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 CENPPQ6IPU0 288 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 TMC8Q8IU68 726 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 FAM186BQ8IYM0 893 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 TCEAL8Q8IYN2 117 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 GIPC2Q8TF65 315 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 CCDC47Q96A33 483 aaKnown RBP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 TIGD1Q96MW7 591 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 SEPT5Q99719 369 aaPredicted RBP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 CRTAC1Q9NQ79 661 aa12.45□□□□□ -0.42
SCMH1-217ENST00000498793 DDX43Q9NXZ2 648 aaKnown RBP12.45□□□□□ -0.42
SCMH1-217ENST00000498793 NXF1Q9UBU9 619 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms