RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 HMGXB4Q9UGU5 601 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 ANAPC7Q9UJX3 599 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 COG5Q9UP83 839 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 PTCH2Q9Y6C5 1203 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 SCINQ9Y6U3 715 aa8.6□□□□□ -1.03
PDZRN3-212ENST00000498048 SHROOM3Q8TF72 1996 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 A0A0U1RQG5 324 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 A0A1W2PQ45 241 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 A0A1W2PQY0 241 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 KBTBD13C9JR72 458 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 M0QYV0 167 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 PGRMC1O00264 195 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 PDE2AO00408 941 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 PPEF2O14830 753 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 SPOPO43791 374 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 CILPO75339 1184 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 CALB1P05937 261 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 PAEPP09466 180 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 GHRP10912 638 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 GRK4P32298 578 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 RAB27AP51159 221 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 TUBB4BP68371 445 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 INCA1Q0VD86 236 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 PTK7Q13308 1070 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 ORC1Q13415 861 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 MESDQ14696 234 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 TCEAL1Q15170 157 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 CFAP221Q4G0U5 840 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 CCDC70Q6NSX1 233 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 FBXO38Q6PIJ6 1188 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 MMS22LQ6ZRQ5 1243 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF572Q7Z3I7 529 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 SLFN11Q7Z7L1 901 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 RPAINQ86UA6 219 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 MCOLN2Q8IZK6 566 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 PDCL2Q8N4E4 241 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 LRRC52Q8N7C0 313 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 NOA1Q8NC60 698 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 TMEM35BQ8NCS4 154 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 MSANTD4Q8NCY6 345 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 CPA5Q8WXQ8 436 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 C18orf25Q96B23 403 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 CYFIP2Q96F07 1278 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 ZMAT2Q96NC0 199 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 TSPAN18Q96SJ8 248 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 FAM124BQ9H5Z6 455 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 ERVK-5Q9HDB9 667 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 HMX1Q9NP08 348 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 TRMT13Q9NUP7 481 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 FAM105AQ9NUU6 356 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 SMARCAL1Q9NZC9 954 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 KLK14Q9P0G3 267 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 ADAM22Q9P0K1 906 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 STXBP5LQ9Y2K9 1186 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 TRIM17Q9Y577 477 aa8.59□□□□□ -1.03
PDZRN3-212ENST00000498048 GRIN2DO15399 1336 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 HTTP42858 3142 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 MIF4GDA9UHW6 222 aaKnown RBP8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 GPR182O15218 404 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CAND2O75155 1236 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CD4P01730 458 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CHRNA1P02708 482 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CFHP08603 1231 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 RHOXF2BP0C7M4 288 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 ITGA4P13612 1032 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 KCNE1P15382 129 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 ZSCAN20P17040 1043 aaPredicted RBP8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 RRM1P23921 792 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 MLH1P40692 756 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 PNPLA4P41247 253 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 TAF6P49848 677 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 RAD23BP54727 409 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CDH8P55286 799 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 ITIH3Q06033 890 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 SV2CQ496J9 727 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 FBXO47Q5MNV8 452 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 SEL1L2Q5TEA6 688 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 C9orf57Q5W0N0 161 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 C8orf74Q6P047 294 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 DNAJC24Q6P3W2 148 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 PHF13Q86YI8 300 aaPredicted RBP8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CREG2Q8IUH2 290 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 UBL4BQ8N7F7 174 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 SLC4A11Q8NBS3 891 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 HES6Q96HZ4 224 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 PBKQ96KB5 322 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 TWNKQ96RR1 684 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 RHOXF2Q9BQY4 288 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 ZSWIM1Q9BR11 485 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 TSEN34Q9BSV6 310 aaKnown RBP8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 SELENOOQ9BVL4 669 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 ELOVL4Q9GZR5 314 aa8.58□□□□□ -1.04
PDZRN3-212ENST00000498048 CXCL16Q9H2A7 254 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms