RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 CT47A1Q5JQC4 288 aaPredicted RBP20.85■□□□□ 0.93
HDAC4-212ENST00000495497 SYCE2Q6PIF2 218 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 LIMS2Q7Z4I7 341 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 TRIM59Q8IWR1 403 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 ADGRF2Q8IZF7 708 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 KREMEN2Q8NCW0 462 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 KBTBD7Q8WVZ9 684 aa20.85■□□□□ 0.93
HDAC4-212ENST00000495497 MRPL45Q9BRJ2 306 aaKnown RBP20.85■□□□□ 0.93
HDAC4-212ENST00000495497 SYCE3A1L190 88 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 SPDYE4A6NLX3 237 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 CCDC192P0DO97 292 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 ACAT1P24752 427 aaKnown RBP20.84■□□□□ 0.93
HDAC4-212ENST00000495497 RAP1GAPP47736 663 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 SKOR2Q2VWA4 1001 aaPredicted RBP20.84■□□□□ 0.93
HDAC4-212ENST00000495497 ZNF667Q5HYK9 610 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 SCARA5Q6ZMJ2 495 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 RNF19BQ6ZMZ0 732 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 THEM5Q8N1Q8 247 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.84■□□□□ 0.93
HDAC4-212ENST00000495497 SMYD3Q9H7B4 428 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 VRTNQ9H8Y1 702 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 APOBEC3GQ9HC16 384 aaKnown RBP20.84■□□□□ 0.93
HDAC4-212ENST00000495497 SAMSN1Q9NSI8 373 aaKnown RBP20.84■□□□□ 0.93
HDAC4-212ENST00000495497 CD207Q9UJ71 328 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 CDH22Q9UJ99 828 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 FBXW11Q9UKB1 542 aa20.84■□□□□ 0.93
HDAC4-212ENST00000495497 OR6C75A6NL08 312 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 RFPL2O75678 378 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 ABLIM3O94929 683 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 ASS1P00966 412 aaKnown RBP20.83■□□□□ 0.93
HDAC4-212ENST00000495497 LMO2P25791 158 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 FMO5P49326 533 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 KCNQ1P51787 676 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 CDH8P55286 799 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 LEXMQ3ZCV2 418 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 ANO6Q4KMQ2 910 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 RARS2Q5T160 578 aaKnown RBP20.83■□□□□ 0.93
HDAC4-212ENST00000495497 TMEM86AQ8N2M4 240 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 FBXL13Q8NEE6 735 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 PGLYRP2Q96PD5 576 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 SDCBP2Q9H190 292 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 S1PR5Q9H228 398 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 THAP9Q9H5L6 903 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 DZANK1Q9NVP4 752 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 RAB20Q9NX57 234 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 DDX43Q9NXZ2 648 aaKnown RBP20.83■□□□□ 0.93
HDAC4-212ENST00000495497 NFE2L3Q9Y4A8 694 aa20.83■□□□□ 0.93
HDAC4-212ENST00000495497 PLXNA3P51805 1871 aa20.83■□□□□ 0.92
HDAC4-212ENST00000495497 GABRDO14764 452 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 SEC24AO95486 1093 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 VNN2O95498 520 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 WEE2P0C1S8 567 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 KCNH2Q12809 1159 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 SLC39A12Q504Y0 691 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 TMC5Q6UXY8 1006 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 DPH6Q7L8W6 267 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 LRRTM3Q86VH5 581 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 ZNF461Q8TAF7 563 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 ENOX1Q8TC92 643 aaKnown RBP20.82■□□□□ 0.92
HDAC4-212ENST00000495497 TAF4BQ92750 862 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 OXCT2Q9BYC2 517 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-212ENST00000495497 ZCWPW1Q9H0M4 648 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 NME7Q9Y5B8 376 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.82■□□□□ 0.92
HDAC4-212ENST00000495497 TSC2P49815 1807 aa20.82■□□□□ 0.92
HDAC4-212ENST00000495497 GRXCR2A6NFK2 248 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 LETM1O95202 739 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-212ENST00000495497 PDGFRBP09619 1106 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 WARSP23381 471 aaKnown RBP20.81■□□□□ 0.92
HDAC4-212ENST00000495497 MTIF2P46199 727 aaKnown RBP20.81■□□□□ 0.92
HDAC4-212ENST00000495497 LHX1P48742 406 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 NOP14P78316 857 aaKnown RBP20.81■□□□□ 0.92
HDAC4-212ENST00000495497 MYL7Q01449 175 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 ADCY1Q08828 1119 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 GPR17Q13304 367 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 CCDC142Q17RM4 750 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDAC4-212ENST00000495497 OR6B3Q8NGW1 331 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 TATDN2Q93075 761 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 FUCA2Q9BTY2 467 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 SNX25Q9H3E2 840 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 PLEKHA4Q9H4M7 779 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 TMLHEQ9NVH6 421 aa20.81■□□□□ 0.92
HDAC4-212ENST00000495497 ATP2C2O75185 946 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 TACC1O75410 805 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 C1RP00736 705 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 AFPP02771 609 aaKnown RBP20.8■□□□□ 0.92
HDAC4-212ENST00000495497 C8AP07357 584 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 ATF2P15336 505 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 HOXB8P17481 243 aaPredicted RBP20.8■□□□□ 0.92
HDAC4-212ENST00000495497 GNL1P36915 607 aaPredicted RBP20.8■□□□□ 0.92
HDAC4-212ENST00000495497 ASPAP45381 313 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 MRPS5P82675 430 aaKnown RBP20.8■□□□□ 0.92
HDAC4-212ENST00000495497 ZSCAN23Q3MJ62 389 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 PTCRAQ6ISU1 281 aaPredicted RBP20.8■□□□□ 0.92
HDAC4-212ENST00000495497 SMRP1Q8NCR6 262 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 SLC7A14Q8TBB6 771 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 HDAC7Q8WUI4 952 aa20.8■□□□□ 0.92
HDAC4-212ENST00000495497 ATXN2LQ8WWM7 1075 aaKnown RBP20.8■□□□□ 0.92
HDAC4-212ENST00000495497 LPIN3Q9BQK8 851 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms