RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TPGS2Q68CL5 300 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 SCARA3Q6AZY7 606 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 RSPO2Q6UXX9 243 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 C15orf39Q6ZRI6 1047 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 KREMEN2Q8NCW0 462 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 FBXL13Q8NEE6 735 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 ZNF461Q8TAF7 563 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 SPATA18Q8TC71 538 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 SNX25Q9H3E2 840 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 THAP9Q9H5L6 903 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 VRTNQ9H8Y1 702 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 SFXN1Q9H9B4 322 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 DDX43Q9NXZ2 648 aaKnown RBP12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 CLEC1BQ9P126 229 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 L1RE1Q9UN81 338 aa12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSNK1E-213ENST00000495232 PLXNA3P51805 1871 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 PRRG1O14668 218 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 TRIM21P19474 475 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 PCSK1P29120 753 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 MTIF2P46199 727 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 ITIH3Q06033 890 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 TYRO3Q06418 890 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 WDR44Q5JSH3 913 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 LILRA6Q6PI73 481 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 DCP1BQ8IZD4 617 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 TAS1R2Q8TE23 839 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 SLC35C1Q96A29 364 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 MSLNLQ96KJ4 702 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 CNOT6LQ96LI5 555 aaKnown RBP12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 APOL5Q9BWW9 433 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 XYLT2Q9H1B5 865 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 CYP4F11Q9HBI6 524 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.343e-6■■■■■ 28.8
CSNK1E-213ENST00000495232 RAB20Q9NX57 234 aa12.95□□□□□ -0.34
CSNK1E-213ENST00000495232 MTCL1Q9Y4B5 1905 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 CCDC195A0A1B0GUA6 201 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 WDR27A2RRH5 827 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ABLIM3O94929 683 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 C8AP07357 584 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 FAM163BP0C2L3 166 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ATF2P15336 505 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 GNL1P36915 607 aaPredicted RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 FMO5P49326 533 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ADCY1Q08828 1119 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 SMARCB1Q12824 385 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 GPR17Q13304 367 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 SMAD4Q13485 552 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 UVSSAQ2YD98 709 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 CBWD6Q4V339 395 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 CBWD3Q5JTY5 395 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 CBWD5Q5RIA9 395 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 PPM1LQ5SGD2 360 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 PTCRAQ6ISU1 281 aaPredicted RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 TMC5Q6UXY8 1006 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 SCARA5Q6ZMJ2 495 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 RTL10Q7L3V2 364 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 TRIM59Q8IWR1 403 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 C12orf76Q8N812 135 aaPredicted RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 SMRP1Q8NCR6 262 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 OR6B3Q8NGW1 331 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 SLC7A14Q8TBB6 771 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ENOX1Q8TC92 643 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 RIPOR3Q96MK2 946 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ASB2Q96Q27 587 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ACBD6Q9BR61 282 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 PI4K2AQ9BTU6 479 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 DNAI2Q9GZS0 605 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 PIDD1Q9HB75 910 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 ZDHHC7Q9NXF8 308 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 FBXW11Q9UKB1 542 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 MAFFQ9ULX9 164 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 NFE2L3Q9Y4A8 694 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 TSC2P49815 1807 aa12.94□□□□□ -0.34
CSNK1E-213ENST00000495232 P4HA2O15460 535 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 TACC1O75410 805 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 LRG1P02750 347 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 TPM2P07951 284 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 OR4Q2P0C623 313 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 WARSP23381 471 aaKnown RBP12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 SLC39A12Q504Y0 691 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 ATAT1Q5SQI0 421 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 SYCE2Q6PIF2 218 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 RNF19BQ6ZMZ0 732 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 OR10T2Q8NGX3 314 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms