RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	ITIH3	Q06033	890 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	HNRNPA0	Q13151	305 aa	Known RBP	5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	MTMR1	Q13613	665 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	PCBP2	Q15366	365 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	CCDC96	Q2M329	555 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	ABCB5	Q2M3G0	1257 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	KHDC1	Q4VXA5	237 aa	Known RBP	5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	TSTD2	Q5T7W7	516 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	PDSS2	Q86YH6	399 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	EGFL6	Q8IUX8	553 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	SDR16C5	Q8N3Y7	309 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	OTUD6B	Q8N6M0	293 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	SCAMP4	Q969E2	229 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	MTMR8	Q96EF0	704 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	BRD9	Q9H8M2	597 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	KMT5A	Q9NQR1	393 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	SIDT1	Q9NXL6	827 aa	Known RBP	5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672	SPATA31A3	Q5VYP0	1347 aa		5.66	□□□□□ -1.5
CCDC66-222	ENST00000494672		F5H697	171 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	INO80B-WBP1	J3KQ70	363 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	POLRMT	O00411	1230 aa	Known RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	GABRD	O14764	452 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	TCERG1	O14776	1098 aa	Known RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	GNAI3	P08754	354 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	PPP3CB	P16298	524 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	MAL	P21145	153 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	CCND1	P24385	295 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	NPTX2	P47972	431 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	ADK	P55263	362 aa	Known RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	GNAI1	P63096	354 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	FOXF2	Q12947	444 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	FAM153C	Q494X1	144 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	HSP90AB3P	Q58FF7	597 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	LRCH2	Q5VUJ6	765 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	TAPT1	Q6NXT6	567 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	ZNF788	Q6ZQV5	615 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	TMPRSS9	Q7Z410	1059 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	SRRM1	Q8IYB3	904 aa	Known RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	MYCBPAP	Q8TBZ2	947 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	POC1B	Q8TC44	478 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	NSUN6	Q8TEA1	469 aa	Known RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	LRIG1	Q96JA1	1093 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	VRK1	Q99986	396 aa	Predicted RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	INO80B	Q9C086	356 aa	Predicted RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	UBA5	Q9GZZ9	404 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	KLC4	Q9NSK0	619 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	CFAP97	Q9P2B7	532 aa		5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
CCDC66-222	ENST00000494672		A0A0B4J269	797 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	ANKRD62	A6NC57	917 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	ALG1L2	C9J202	215 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	ADM5	C9JUS6	153 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	MC2R	Q01718	297 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	SNAPC2	Q13487	334 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	TUBB3	Q13509	450 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	HDAC1	Q13547	482 aa	Predicted RBP	5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	TXNRD1	Q16881	649 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	CCDC93	Q567U6	631 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	PTF1A	Q7RTS3	328 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	SARAF	Q96BY9	339 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	HAPLN3	Q96S86	360 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	TSPAN18	Q96SJ8	248 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	RLIM	Q9NVW2	624 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	POLH	Q9Y253	713 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	SBNO2	Q9Y2G9	1366 aa		5.64	□□□□□ -1.51
CCDC66-222	ENST00000494672	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	CCER2	I3L3R5	266 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	F2RL2	O00254	374 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	TRIAP1	O43715	76 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	KATNA1	O75449	491 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	ARIH2	O95376	493 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	ABCG1	P45844	678 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	ATXN1	P54253	815 aa	Known RBP	5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	DSC2	Q02487	901 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	SRSF4	Q08170	494 aa	Known RBP	5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	PTPN21	Q16825	1174 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	WDR78	Q5VTH9	848 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	KIAA1614	Q5VZ46	1190 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	SLC4A10	Q6U841	1118 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	SLC30A10	Q6XR72	485 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	KRBA2	Q6ZNG9	492 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	MIER2	Q8N344	545 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	C3orf20	Q8ND61	904 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	SIK2	Q9H0K1	926 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	TMEM51	Q9NW97	253 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	SLC52A1	Q9NWF4	448 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	NR2E3	Q9Y5X4	410 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672	WNT6	Q9Y6F9	365 aa		5.63	□□□□□ -1.51
CCDC66-222	ENST00000494672		E9PLN8	166 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	FZD9	O00144	591 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	SOAT2	O75908	522 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	CHEK2	O96017	543 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	GJB1	P08034	283 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	ELFN1	P0C7U0	828 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	FTH1P19	P0C7X4	201 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	PSMC1	P62191	440 aa	Known RBP	5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	LONRF3	Q496Y0	759 aa		5.62	□□□□□ -1.51
CCDC66-222	ENST00000494672	THEMIS2	Q5TEJ8	643 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms