RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 ABCB6Q9NP58 842 aa9.91□□□□□ -0.82
SUPT20H-220ENST00000490716 CRTAC1Q9NQ79 661 aa9.91□□□□□ -0.82
SUPT20H-220ENST00000490716 CCDC195A0A1B0GUA6 201 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 ZNF233A6NK53 670 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 DLL1O00548 723 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 SLC16A3O15427 465 aaKnown RBP9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 HCRTO43612 131 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 NOL4O94818 638 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 SURF1Q15526 300 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 CFAP221Q4G0U5 840 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 LLGL2Q6P1M3 1020 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 CNTN6Q9UQ52 1028 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 CLIC2O15247 247 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 ASS1P00966 412 aaKnown RBP9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 ITGB3P05106 788 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 IDEP14735 1019 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 ATICP31939 592 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 OR1D2P34982 312 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 FZD5Q13467 585 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 TMEM86AQ8N2M4 240 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 EDAQ92838 391 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 CSNK1G1Q9HCP0 422 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 DSEQ9UL01 958 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 INSL5Q9Y5Q6 135 aa9.9□□□□□ -0.82
SUPT20H-220ENST00000490716 HHLA1C9JL84 531 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 TNFRSF10BO14763 440 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 TRAPPC3O43617 180 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 PRPF40AO75400 957 aaKnown RBP9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 TCF3P15923 654 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 ZXDAP98168 799 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 CCDC142Q17RM4 750 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 WDR44Q5JSH3 913 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 SMYD4Q8IYR2 804 aaPredicted RBP9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 GJD3Q8N144 294 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 SEMA4DQ92854 862 aa9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 TRMT2BQ96GJ1 504 aaKnown RBP9.9□□□□□ -0.83
SUPT20H-220ENST00000490716 SOBPA7XYQ1 873 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 KRT18P05783 430 aaKnown RBP9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 KLRC2P26717 231 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 POLR2BP30876 1174 aaKnown RBP9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 TAF6P49848 677 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 PTPN21Q16825 1174 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 SNX30Q5VWJ9 437 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 PPP2R3CQ969Q6 453 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 TTLL2Q9BWV7 592 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 SLC2A4RGQ9NR83 387 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 H7C4K7 107 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 HAPLN1P10915 354 aaPredicted RBP9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 MAGEA11P43364 429 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 RPL34P49207 117 aaKnown RBP9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 AP3M2P53677 418 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 SMARCB1Q12824 385 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 WSCD1Q658N2 575 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 TRIML1Q8N9V2 468 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 RIN3Q8TB24 985 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 PSMG2Q969U7 264 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 SLC35C1Q96A29 364 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 BICD1Q96G01 975 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 ZNF334Q9HCZ1 680 aaPredicted RBP9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 HCFC1R1Q9NWW0 138 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 DLGAP2Q9P1A6 1054 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 ZFP37Q9Y6Q3 630 aaPredicted RBP9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 OLFM2O95897 454 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 LMO2P25791 158 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 SV2CQ496J9 727 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 INTS6LQ5JSJ4 861 aaKnown RBP9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 STXBP4Q6ZWJ1 553 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 NELFCDQ8IXH7 590 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 APPL2Q8NEU8 664 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 SPATA17Q96L03 361 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 SMOC2Q9H3U7 446 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 EXOC1Q9NV70 894 aa9.89□□□□□ -0.83
SUPT20H-220ENST00000490716 ODC1P11926 461 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 CACNA2D1P54289 1103 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 LRRC63Q05C16 580 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 RARS2Q5T160 578 aaKnown RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 SV2AQ7L0J3 742 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 ERCC4Q92889 916 aaPredicted RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 RSPRY1Q96DX4 576 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 DHTKD1Q96HY7 919 aaPredicted RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 MRPL45Q9BRJ2 306 aaKnown RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 FUCA2Q9BTY2 467 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 CLSTN2Q9H4D0 955 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 TRPV5Q9NQA5 729 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 KIAA1468Q9P260 1216 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 XPOTO43592 962 aaKnown RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 F11P03951 625 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 HSP90AA1P07900 732 aaKnown RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 LAMP2P13473 410 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 YWHAHQ04917 246 aaPredicted RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 BFSP1Q12934 665 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 DUOXA2Q1HG44 320 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 GAREM2Q75VX8 874 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 BHLHA9Q7RTU4 235 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 APTXQ7Z2E3 356 aaKnown RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 CRYBG2Q8N1P7 616 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 IPO9Q96P70 1041 aaKnown RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 LRRC3BQ96PB8 259 aa9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 GTPBP4Q9BZE4 634 aaKnown RBP9.88□□□□□ -0.83
SUPT20H-220ENST00000490716 CHD5Q8TDI0 1954 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms