RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HCN4Q9Y3Q4 1203 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PCDHA3Q9Y5H8 950 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 PTPRUQ92729 1446 aa5.03□□□□□ -1.6
SNRNP40-206ENST00000489853 EP400Q96L91 3159 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM2Q9UHN6 1383 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 PFASO15067 1338 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ADGRA3Q8IWK6 1321 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 A0A088AWK7 358 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NPHP3-ACAD11A0A0J9YXS1 232 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC160A6NGH7 325 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 KCNQ3O43525 872 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ADAM23O75077 832 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ZBED4O75132 1171 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 BAG2O95816 211 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 IL2RAP01589 272 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 SMIM18P0DKX4 95 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ESRRAP11474 423 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ALAS1P13196 640 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 POLR2EP19388 210 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 FGFR4P22455 802 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC5A2P31639 672 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 EPS15P42566 896 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 CCR3P51677 355 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NUP107P57740 925 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ACTR3P61158 418 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 RACK1P63244 317 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 TUBA4AP68366 448 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 IRX4P78413 519 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 AMPD3Q01432 767 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NSUN2Q08J23 767 aaKnown RBP eCLIP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 STK4Q13043 487 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 PPP2R5CQ13362 524 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 PDK4Q16654 411 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM266Q2M3C6 531 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 MYLK3Q32MK0 819 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ARL13BQ3SXY8 428 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 MMEL1Q495T6 779 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NADK2Q4G0N4 442 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 LCE2AQ5TA79 106 aaPredicted RBP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 FAM91A1Q658Y4 838 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ATG9AQ7Z3C6 839 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 TMPRSS6Q8IU80 811 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 C4orf32Q8N8J7 132 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 CXorf38Q8TB03 319 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 CCDC110Q8TBZ0 833 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 USP33Q8TEY7 942 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ZDHHC1Q8WTX9 485 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 SCFD1Q8WVM8 642 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NACC2Q96BF6 587 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 KLRG1Q96E93 195 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 EEF2KMTQ96G04 330 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 DMRTB1Q96MA1 342 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NSMCE3Q96MG7 304 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC25Q96NG3 672 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC4A9Q96Q91 983 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 PPP1R10Q96QC0 940 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NACAP1Q9BZK3 213 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 LRRC27Q9C0I9 530 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 SEMA6BQ9H3T3 888 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 CLK4Q9HAZ1 481 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 DENND2AQ9ULE3 1009 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 PADI4Q9UM07 663 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 RABL2BQ9UNT1 228 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NAALADL1Q9UQQ1 740 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 NR2E1Q9Y466 385 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ADAMTS13Q76LX8 1427 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 PARP4Q9UKK3 1724 aaKnown RBP5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 HEG1Q9ULI3 1381 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 PIK3C2AO00443 1686 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 ECM29Q5VYK3 1845 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 FRMPD4Q14CM0 1322 aa5.02□□□□□ -1.61
SNRNP40-206ENST00000489853 CFAP69A5D8W1 941 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DDX3YO15523 660 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PRPF4O43172 522 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DKC1O60832 514 aaKnown RBP eCLIP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 CDH16O75309 829 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 SPAG7O75391 227 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 IDH1O75874 414 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 BAIAP3O94812 1187 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PGM3O95394 542 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 GGPS1O95749 300 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC4O95801 387 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NR3C2P08235 984 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 H2AFZP0C0S5 128 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 AMPD1P23109 780 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 TKTP29401 623 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PHBP35232 272 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 UBA7P41226 1012 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 PHKA2P46019 1235 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 RXRGP48443 463 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NR1H2P55055 460 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 VCPP55072 806 aaKnown RBP5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 LRRC63Q05C16 580 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DNAJC3Q13217 504 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 DGKZQ13574 1117 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 WTAPQ15007 396 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 NIPAL1Q6NVV3 410 aa5.01□□□□□ -1.61
SNRNP40-206ENST00000489853 ALKBH5Q6P6C2 394 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms