RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 GRSF1Q12849 480 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP1-212ENST00000489378 SEMA3BQ13214 749 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 CTTNQ14247 550 aaKnown RBP10.1□□□□□ -0.79
SSBP1-212ENST00000489378 TPGS2Q68CL5 300 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 PIGKQ92643 395 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 LSG1Q9H089 658 aaKnown RBP10.1□□□□□ -0.79
SSBP1-212ENST00000489378 SLKQ9H2G2 1235 aaPredicted RBP10.1□□□□□ -0.79
SSBP1-212ENST00000489378 CCDC86Q9H6F5 360 aaKnown RBP10.1□□□□□ -0.79
SSBP1-212ENST00000489378 EBF1Q9UH73 591 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 DACH1Q9UI36 760 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 NAP1L2Q9ULW6 460 aaPredicted RBP10.1□□□□□ -0.79
SSBP1-212ENST00000489378 GDAQ9Y2T3 454 aa10.1□□□□□ -0.79
SSBP1-212ENST00000489378 OTOL1A6NHN0 477 aaPredicted RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 TRDMT1O14717 391 aaKnown RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 C1QL1O75973 258 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 CD2BP2O95400 341 aaKnown RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 DGKEP52429 567 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 CYP4A11Q02928 519 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 SOX4Q06945 474 aaPredicted RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 C19orf57Q0VDD7 668 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 MRPL58Q14197 206 aaKnown RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 TRIM61Q5EBN2 209 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 NAIF1Q69YI7 327 aaPredicted RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 OTUD6AQ7L8S5 288 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 MDM1Q8TC05 714 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 CRELD1Q96HD1 420 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 DYDC2Q96IM9 177 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 TPSD1Q9BZJ3 242 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 DNAJC25Q9H1X3 360 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 AFF4Q9UHB7 1163 aaKnown RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 DDX25Q9UHL0 483 aaKnown RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 EVLQ9UI08 416 aaPredicted RBP10.09□□□□□ -0.79
SSBP1-212ENST00000489378 YIPF1Q9Y548 306 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 ADAMTS9Q9P2N4 1935 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 SPTA1P02549 2419 aa10.09□□□□□ -0.79
SSBP1-212ENST00000489378 H7C4K7 107 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 VNN2O95498 520 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 ENGP17813 658 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 U2AF2P26368 475 aaKnown RBP eCLIP10.08□□□□□ -0.8
SSBP1-212ENST00000489378 DHPSP49366 369 aaPredicted RBP10.08□□□□□ -0.8
SSBP1-212ENST00000489378 MMP16P51512 607 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 LMAN2Q12907 356 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 DMC1Q14565 340 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 NECTIN1Q15223 517 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 EPHA7Q15375 998 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 CTXN3Q4LDR2 81 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 EEF1DP3Q658K8 133 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 GAREM2Q75VX8 874 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 SYT13Q7L8C5 426 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 RPLP0P6Q8NHW5 317 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 BPIFB1Q8TDL5 484 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 EZH1Q92800 747 aaPredicted RBP10.08□□□□□ -0.8
SSBP1-212ENST00000489378 UROC1Q96N76 676 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
SSBP1-212ENST00000489378 POLR3FQ9H1D9 316 aaPredicted RBP10.08□□□□□ -0.8
SSBP1-212ENST00000489378 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 FZD8Q9H461 694 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 HPS4Q9NQG7 708 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 FSCN3Q9NQT6 498 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 OBP2AQ9NY56 170 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 MBD1Q9UIS9 605 aaPredicted RBP10.08□□□□□ -0.8
SSBP1-212ENST00000489378 MYO16Q9Y6X6 1858 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 KIAA1549LQ6ZVL6 1849 aa10.08□□□□□ -0.8
SSBP1-212ENST00000489378 TNRC6BQ9UPQ9 1833 aaKnown RBP10.08□□□□□ -0.8
SSBP1-212ENST00000489378 LRRIQ4A6NIV6 560 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 UPK3BL1B0FP48 263 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 UPK3BL2E5RIL1 263 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 SYN3O14994 580 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 N4BP3O15049 544 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 EDN1P05305 212 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PLA2G2AP14555 144 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 RDXP35241 583 aaKnown RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 GALK1P51570 392 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 RCAN1P53805 252 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 ZNF423Q2M1K9 1284 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 GPR158Q5T848 1215 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 LCE2AQ5TA79 106 aaPredicted RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 LARP1BQ659C4 914 aaKnown RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PRIMPOLQ96LW4 560 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 FAM83CQ9BQN1 747 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 POLR3CQ9BUI4 534 aaPredicted RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 ZSWIM4Q9H7M6 989 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 KCNMB3Q9NPA1 279 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 GPRC5CQ9NQ84 441 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 TMEM74BQ9NUR3 256 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PRMT7Q9NVM4 692 aaPredicted RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PTPRDP23468 1912 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 SMIM28A0A1B0GU29 152 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PODXLO00592 558 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 CPB1P15086 417 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 MCM2P49736 904 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 NLRP5P59047 1200 aa10.07□□□□□ -0.8
SSBP1-212ENST00000489378 PRPF4BQ13523 1007 aaKnown RBP10.07□□□□□ -0.8
SSBP1-212ENST00000489378 RUNX3Q13761 415 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms