RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 ITIH5Q86UX2 942 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 IFNLR1Q8IU57 520 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-233ENST00000489352 CCDC33Q8N5R6 958 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 DEFB119Q8N690 84 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 OLIG1Q8TAK6 271 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 POLR3CQ9BUI4 534 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-233ENST00000489352 LRRC3Q9BY71 257 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 NXF1Q9UBU9 619 aaKnown RBP12.67□□□□□ -0.38
HDAC6-233ENST00000489352 DNMT3LQ9UJW3 386 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 PCOLCE2Q9UKZ9 415 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 DOPEY2Q9Y3R5 2298 aa12.67□□□□□ -0.38
HDAC6-233ENST00000489352 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 N4BP3O15049 544 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 IL12RB1P42701 662 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 SEMG2Q02383 582 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 NR1H3Q13133 447 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 PDGFRLQ15198 375 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 CRY1Q16526 586 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 PREPLQ4J6C6 727 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-233ENST00000489352 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 DNAJB7Q7Z6W7 309 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-233ENST00000489352 NOSTRINQ8IVI9 506 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 RGL4Q8IZJ4 473 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 FRMD1Q8N878 549 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 APPL2Q8NEU8 664 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 NXPE2Q96DL1 559 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 CDC6Q99741 560 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 LNPKQ9C0E8 428 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 GOLGA2P5Q9HBQ8 144 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 MMP17Q9ULZ9 603 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 AK5Q9Y6K8 562 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 KNTC1P50748 2209 aa12.66□□□□□ -0.38
HDAC6-233ENST00000489352 DENND4CQ5VZ89 1909 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
HDAC6-233ENST00000489352 C6P13671 934 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 ARSAP15289 507 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 GNSP15586 552 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 CDC25CP30307 473 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 YWHABP31946 246 aaKnown RBP12.65□□□□□ -0.38
HDAC6-233ENST00000489352 CYP4F8P98187 520 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 ZNF33AQ06730 810 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 DUSP4Q13115 394 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 CAPSQ13938 189 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 CCDC157Q569K6 752 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 COLEC12Q5KU26 742 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 PRICKLE2Q7Z3G6 844 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 C3orf58Q8NDZ4 430 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 USP33Q8TEY7 942 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 HMGB4Q8WW32 186 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 WBP1Q96G27 269 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 PRIMPOLQ96LW4 560 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 CCDC43Q96MW1 224 aaKnown RBP12.65□□□□□ -0.38
HDAC6-233ENST00000489352 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 NFKBIZQ9BYH8 718 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 CXCL16Q9H2A7 254 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 PRMT7Q9NVM4 692 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-233ENST00000489352 ZMYM5Q9UJ78 669 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 RCAN3Q9UKA8 241 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 TBX20Q9UMR3 447 aa12.65□□□□□ -0.38
HDAC6-233ENST00000489352 A0A1W2PQD8 194 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 ESYT2A0FGR8 921 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 PLK4O00444 970 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 ATXN1LP0C7T5 689 aaKnown RBP12.64□□□□□ -0.39
HDAC6-233ENST00000489352 RHDQ02161 417 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 MRPL58Q14197 206 aaKnown RBP12.64□□□□□ -0.39
HDAC6-233ENST00000489352 RTN1Q16799 776 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 C6orf118Q5T5N4 469 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 NAIF1Q69YI7 327 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-233ENST00000489352 CD300LGQ6UXG3 332 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 SPATA18Q8TC71 538 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 RHBDD1Q8TEB9 315 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 SPIRE2Q8WWL2 714 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 PSMG2Q969U7 264 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 PPP1R10Q96QC0 940 aaKnown RBP12.64□□□□□ -0.39
HDAC6-233ENST00000489352 ZDHHC5Q9C0B5 715 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 FAM124BQ9H5Z6 455 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-233ENST00000489352 ECT2Q9H8V3 914 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 SUSD2Q9UGT4 822 aa12.64□□□□□ -0.39
HDAC6-233ENST00000489352 UBR5O95071 2799 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-233ENST00000489352 LRRIQ4A6NIV6 560 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 PODXLO00592 558 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 CBFA2T3O75081 653 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 GJB3O75712 270 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 MCM4P33991 863 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 PTH1RQ03431 593 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 VEPH1Q14D04 833 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 Q4G0T1 1027 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 PCSK4Q6UW60 755 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-233ENST00000489352 FMNL3Q8IVF7 1028 aa12.63□□□□□ -0.39
HDAC6-233ENST00000489352 ZBTB8OSQ8IWT0 167 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms