RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 USP15Q9Y4E8 981 aaPredicted RBP11.88□□□□□ -0.51
NUP98-212ENST00000488828 BACE2Q9Y5Z0 518 aa11.88□□□□□ -0.51
NUP98-212ENST00000488828 RCCD1A6NED2 376 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 M0QZQ0 153 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 PRRG1O14668 218 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 HUS1O60921 280 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 PSMC2P35998 433 aaKnown RBP11.87□□□□□ -0.51
NUP98-212ENST00000488828 RAB33AQ14088 237 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 PPM1LQ5SGD2 360 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 ANKRD40Q6AI12 368 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 RSPO2Q6UXX9 243 aaPredicted RBP11.87□□□□□ -0.51
NUP98-212ENST00000488828 CLEC17AQ6ZS10 378 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 TRAPPC11Q7Z392 1133 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 FAM186BQ8IYM0 893 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 SMRP1Q8NCR6 262 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 SPATA20Q8TB22 786 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
NUP98-212ENST00000488828 HPDLQ96IR7 371 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 RIPOR3Q96MK2 946 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 NECAB3Q96P71 396 aaPredicted RBP11.87□□□□□ -0.51
NUP98-212ENST00000488828 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 UHRF1Q96T88 793 aaPredicted RBP11.87□□□□□ -0.51
NUP98-212ENST00000488828 ADAM7Q9H2U9 754 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 SFXN1Q9H9B4 322 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 DMAC2Q9NW81 257 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 DSEQ9UL01 958 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 POLIQ9UNA4 740 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 SNX9Q9Y5X1 595 aa11.87□□□□□ -0.51
NUP98-212ENST00000488828 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 DLL1O00548 723 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 RFPL2O75678 378 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 TYMPP19971 482 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 SP100P23497 879 aaPredicted RBP11.86□□□□□ -0.51
NUP98-212ENST00000488828 PPP1R2P41236 205 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 MTHFRP42898 656 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 VAMP7P51809 220 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 AP3M2P53677 418 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 CBX2Q14781 532 aaPredicted RBP11.86□□□□□ -0.51
NUP98-212ENST00000488828 SMAD2Q15796 467 aaKnown RBP11.86□□□□□ -0.51
NUP98-212ENST00000488828 EDRF1Q3B7T1 1238 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 WSCD1Q658N2 575 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 LILRA6Q6PI73 481 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 ADSSL1Q8N142 457 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 PARD3BQ8TEW8 1205 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 HDAC7Q8WUI4 952 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 SMG7Q92540 1137 aaKnown RBP11.86□□□□□ -0.51
NUP98-212ENST00000488828 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 OXCT2Q9BYC2 517 aaPredicted RBP11.86□□□□□ -0.51
NUP98-212ENST00000488828 S1PR5Q9H228 398 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 MMRN2Q9H8L6 949 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 CYP4F11Q9HBI6 524 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 LMBRD1Q9NUN5 540 aa11.86□□□□□ -0.51
NUP98-212ENST00000488828 A0A0C4DFX4 3053 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 OR6C75A6NL08 312 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 AKAP3O75969 853 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 OAZ2O95190 189 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 C1RP00736 705 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 CST3P01034 146 aaPredicted RBP11.85□□□□□ -0.51
NUP98-212ENST00000488828 C8AP07357 584 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 OR4Q2P0C623 313 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 EPB41P11171 864 aaKnown RBP11.85□□□□□ -0.51
NUP98-212ENST00000488828 AARSP49588 968 aaKnown RBP eCLIP11.85□□□□□ -0.51
NUP98-212ENST00000488828 CDR1P51861 262 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 TNNC1P63316 161 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 DLG4P78352 724 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 FKBP3Q00688 224 aaKnown RBP11.85□□□□□ -0.51
NUP98-212ENST00000488828 ROR1Q01973 937 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 MORC3Q14149 939 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 MRPL58Q14197 206 aaKnown RBP11.85□□□□□ -0.51
NUP98-212ENST00000488828 SCARA3Q6AZY7 606 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 CENPPQ6IPU0 288 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 CCDC149Q6ZUS6 474 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 INTS8Q75QN2 995 aaKnown RBP11.85□□□□□ -0.51
NUP98-212ENST00000488828 CREBRFQ8IUR6 639 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 SLC7A14Q8TBB6 771 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 ZNF516Q92618 1163 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 NECTIN4Q96NY8 510 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 PGLYRP2Q96PD5 576 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 COL25A1Q9BXS0 654 aaPredicted RBP11.85□□□□□ -0.51
NUP98-212ENST00000488828 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 NXF1Q9UBU9 619 aaKnown RBP11.85□□□□□ -0.51
NUP98-212ENST00000488828 SIX4Q9UIU6 781 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 CDH22Q9UJ99 828 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 BRWD1Q9NSI6 2320 aa11.85□□□□□ -0.51
NUP98-212ENST00000488828 ATG2AQ2TAZ0 1938 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 BICDL2A1A5D9 508 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 TRIM49BA6NDI0 452 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 LRRIQ3A6PVS8 624 aaPredicted RBP11.84□□□□□ -0.51
NUP98-212ENST00000488828 CCL16O15467 120 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 RNF40O75150 1001 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 XYLBO75191 536 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 LRG1P02750 347 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 TRIM49P0CI25 452 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 TRIM49CP0CI26 452 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 CCNE1P24864 410 aa11.84□□□□□ -0.51
NUP98-212ENST00000488828 STX17P56962 302 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms