RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 BAIAP2L1Q9UHR4 511 aa13.42□□□□□ -0.26
CLIC4-202ENST00000488683 A0A0B4J269 797 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 LRRD1A4D1F6 860 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 KRT19P08727 400 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 UBA1P22314 1058 aaKnown RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 FOXN2P32314 431 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 ARSEP51690 589 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 GNPTABQ3T906 1256 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 PLEKHA7Q6IQ23 1121 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 GPAT2Q6NUI2 795 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 RHOT1Q8IXI2 618 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 WDTC1Q8N5D0 677 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 TRIM11Q96F44 468 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 KIAA1586Q9HCI6 787 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 SLCO1B3Q9NPD5 702 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 BTBD7Q9P203 1132 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 CYTH4Q9UIA0 394 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 GOLGA8RI6L899 631 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 ARIH2O95376 493 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 GAS8O95995 478 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 PECAM1P16284 738 aaPredicted RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 BPIFB4P59827 614 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 MGAT5Q09328 741 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 GJC2Q5T442 439 aaPredicted RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 CCDC33Q8N5R6 958 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 JOSD2Q8TAC2 188 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 SLC7A3Q8WY07 619 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 C12orf42Q96LP6 360 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 CGRRF1Q99675 332 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 ROPN1BQ9BZX4 212 aaPredicted RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 CCDC134Q9H6E4 229 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 ROPN1Q9HAT0 212 aaPredicted RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 ALG13Q9NP73 1137 aaKnown RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 HMGXB4Q9UGU5 601 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 GRID1Q9ULK0 1009 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 STK38LQ9Y2H1 464 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 A0A1W2PPM1 405 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 WDR91A4D1P6 747 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 PSTPIP1O43586 416 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 ATG7O95352 703 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 PIGRP01833 764 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 NAMPTP43490 491 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 DALRD3Q5D0E6 543 aaKnown RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 DCUN1D2Q6PH85 259 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 MOB2Q70IA6 237 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 NCAPG2Q86XI2 1143 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 PHF13Q86YI8 300 aaPredicted RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 PARP9Q8IXQ6 854 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 KATNAL2Q8IYT4 538 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 KIAA0319LQ8IZA0 1049 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 FEZF2Q8TBJ5 459 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 TGS1Q96RS0 853 aaKnown RBP13.41□□□□□ -0.26
CLIC4-202ENST00000488683 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 L3MBTL1Q9Y468 752 aa13.41□□□□□ -0.26
CLIC4-202ENST00000488683 BRCA1P38398 1863 aaKnown RBP13.4□□□□□ -0.26
CLIC4-202ENST00000488683 H0YCG3 227 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 ASAP2O43150 1006 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 CD19P15391 556 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 GCAP28676 217 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 TCF7P36402 384 aaPredicted RBP13.4□□□□□ -0.26
CLIC4-202ENST00000488683 MAGEA4P43358 317 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 TGFB2P61812 414 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 IGBP1P78318 339 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 PLCB4Q15147 1175 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 PKN2Q16513 984 aaKnown RBP13.4□□□□□ -0.26
CLIC4-202ENST00000488683 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 HSDL1Q3SXM5 330 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
CLIC4-202ENST00000488683 SH3PXD2AQ5TCZ1 1133 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 ANKRD22Q5VYY1 191 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 DCAF15Q66K64 600 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 DENND1BQ6P3S1 775 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 TRPM8Q7Z2W7 1104 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 ZBED8Q8IZ13 594 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 RNF149Q8NC42 400 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.4□□□□□ -0.26
CLIC4-202ENST00000488683 SERPINB12Q96P63 405 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.26
CLIC4-202ENST00000488683 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
CLIC4-202ENST00000488683 VPS37BQ9H9H4 285 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 CISHQ9NSE2 258 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 CNTN6Q9UQ52 1028 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 LOC285556D6RIA3 1793 aa13.4□□□□□ -0.26
CLIC4-202ENST00000488683 TCRBV7S3A2A0A539 114 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 RASA4BC9J798 803 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 ATP2A1O14983 1001 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 RASA4O43374 803 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 SNX3O60493 162 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.27
CLIC4-202ENST00000488683 KLRC2P26717 231 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 DNAJC3Q13217 504 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 CCNG2Q16589 344 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 TMEM132AQ24JP5 1023 aa13.4□□□□□ -0.27
CLIC4-202ENST00000488683 LIN9Q5TKA1 542 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms