RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PAPD7Q5XG87 772 aaKnown RBP13.58□□□□□ -0.24
NELFE-209ENST00000488426 RBBP8NLQ8NC74 664 aaPredicted RBP13.58□□□□□ -0.24
NELFE-209ENST00000488426 CXorf38Q8TB03 319 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 PHOSPHO2Q8TCD6 241 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 KIF12Q96FN5 646 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 CALR3Q96L12 384 aaKnown RBP13.58□□□□□ -0.24
NELFE-209ENST00000488426 SLC9A7Q96T83 725 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
NELFE-209ENST00000488426 CNTN3Q9P232 1028 aa13.58□□□□□ -0.24
NELFE-209ENST00000488426 NOC2LQ9Y3T9 749 aaKnown RBP13.58□□□□□ -0.24
NELFE-209ENST00000488426 TRIP11Q15643 1979 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 CAND2O75155 1236 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 RPS6KA5O75582 802 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 RECQL4O94761 1208 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 ASPAP45381 313 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 ZNF132P52740 706 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 NAP1L1P55209 391 aaKnown RBP13.57□□□□□ -0.24
NELFE-209ENST00000488426 RBP5P82980 135 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 IKBKEQ14164 716 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 CCDC85BQ15834 202 aaPredicted RBP13.57□□□□□ -0.24
NELFE-209ENST00000488426 ZNF667Q5HYK9 610 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 TAF3Q5VWG9 929 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 SCARA3Q6AZY7 606 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 TMEM270Q6UE05 265 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 TRIM72Q6ZMU5 477 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 PALB2Q86YC2 1186 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 RFFLQ8WZ73 363 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 NXF3Q9H4D5 531 aaKnown RBP13.57□□□□□ -0.24
NELFE-209ENST00000488426 CHST12Q9NRB3 414 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 DPP3Q9NY33 737 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 ABHD14A-ACY1A0A1B0GW23 586 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.57□□□□□ -0.24
NELFE-209ENST00000488426 BUB1O43683 1085 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 TLL1O43897 1013 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 ATP1A1P05023 1023 aaKnown RBP13.57□□□□□ -0.24
NELFE-209ENST00000488426 P4HA1P13674 534 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 TCEAL1Q15170 157 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 ZBTB6Q15916 424 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 FAM26DQ5JW98 314 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 ALKAL1Q6UXT8 129 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 PCDHB18PQ96TA0 734 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 ACP6Q9NPH0 428 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 CISHQ9NSE2 258 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 TAS2R14Q9NYV8 317 aa13.57□□□□□ -0.24
NELFE-209ENST00000488426 TMCO5BA8MYB1 307 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 GPR182O15218 404 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 GJB5O95377 273 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
NELFE-209ENST00000488426 FTLP02792 175 aaPredicted RBP13.56□□□□□ -0.24
NELFE-209ENST00000488426 GHRP10912 638 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 PRLRP16471 622 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 IGFBP4P22692 258 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 GNA15P30679 374 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 POLR2BP30876 1174 aaKnown RBP13.56□□□□□ -0.24
NELFE-209ENST00000488426 LPIN1Q14693 890 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 WHAMMP3Q1A5X7 153 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 CLEC16AQ2KHT3 1053 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 XKR4Q5GH76 650 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 TWF2Q6IBS0 349 aaKnown RBP13.56□□□□□ -0.24
NELFE-209ENST00000488426 PPP1R2P3Q6NXS1 205 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 RHOT2Q8IXI1 618 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 BEST2Q8NFU1 509 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 AGO3Q9H9G7 860 aaKnown RBP13.56□□□□□ -0.24
NELFE-209ENST00000488426 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 AGAP1Q9UPQ3 857 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 SAR1BQ9Y6B6 198 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 MICAL3Q7RTP6 2002 aa13.56□□□□□ -0.24
NELFE-209ENST00000488426 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 ENC1O14682 589 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
NELFE-209ENST00000488426 PALMO75781 387 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 KCNE1P15382 129 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 NOP2P46087 812 aaKnown RBP13.55□□□□□ -0.24
NELFE-209ENST00000488426 HADHBP55084 474 aaKnown RBP13.55□□□□□ -0.24
NELFE-209ENST00000488426 WDR72Q3MJ13 1102 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.55□□□□□ -0.24
NELFE-209ENST00000488426 TTC39CQ8N584 583 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 MNS1Q8NEH6 495 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 ARNTL2Q8WYA1 636 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 HPDLQ96IR7 371 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 NXF1Q9UBU9 619 aaKnown RBP13.55□□□□□ -0.24
NELFE-209ENST00000488426 UBQLN1Q9UMX0 589 aaKnown RBP13.55□□□□□ -0.24
NELFE-209ENST00000488426 ST3GAL5Q9UNP4 418 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 HES2Q9Y543 173 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 IPPQ9Y573 584 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 SQORQ9Y6N5 450 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 GRID2IPA4D2P6 1211 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 ABCB4P21439 1286 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 GPC5P78333 572 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 MYO1EQ12965 1108 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 ACAD10Q6JQN1 1059 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 DNAAF5Q86Y56 855 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 HACE1Q8IYU2 909 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 LRRC52Q8N7C0 313 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 CEP112Q8N8E3 955 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 SMG8Q8ND04 991 aaKnown RBP13.55□□□□□ -0.24
NELFE-209ENST00000488426 TPCN2Q8NHX9 752 aa13.55□□□□□ -0.24
NELFE-209ENST00000488426 ZMAT2Q96NC0 199 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms