RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ALG13Q9NP73 1137 aaKnown RBP6.75□□□□□ -1.33
LTN1-206ENST00000486427 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.75□□□□□ -1.33
LTN1-206ENST00000486427 C11orf21Q9P2W6 132 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 GABBR1Q9UBS5 961 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 NEU2Q9Y3R4 380 aa6.75□□□□□ -1.33
LTN1-206ENST00000486427 H3BML4 177 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 VPS4BO75351 444 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 CHEK2O96017 543 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 CHRM3P20309 590 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 TOB1P50616 345 aaPredicted RBP6.74□□□□□ -1.33
LTN1-206ENST00000486427 TCF15Q12870 199 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 GTF2H3Q13889 308 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 TAF2Q6P1X5 1199 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 PPP1R32Q7Z5V6 425 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 USP37Q86T82 979 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 CAMKK1Q8N5S9 505 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 ZBTB34Q8NCN2 500 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 PSD4Q8NDX1 1056 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 SLC30A5Q8TAD4 765 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 LPIN2Q92539 896 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 INTS13Q9NVM9 706 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 STAP2Q9UGK3 403 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 PCDHA6Q9UN73 950 aa6.74□□□□□ -1.33
LTN1-206ENST00000486427 G3BP2Q9UN86 482 aaKnown RBP6.74□□□□□ -1.33
LTN1-206ENST00000486427 E7ENX8 843 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 UBXN7O94888 489 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 HTR1BP28222 390 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 IL12RB1P42701 662 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 INHBEP58166 350 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 RAB1AP62820 205 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 TAP2Q03519 686 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 BOP1Q14137 746 aaKnown RBP6.73□□□□□ -1.33
LTN1-206ENST00000486427 PPP2R5AQ15172 486 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 PREPLQ4J6C6 727 aaPredicted RBP6.73□□□□□ -1.33
LTN1-206ENST00000486427 TSHZ1Q6ZSZ6 1077 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 MICALCLQ6ZW33 695 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 COL23A1Q86Y22 540 aaPredicted RBP6.73□□□□□ -1.33
LTN1-206ENST00000486427 CHPFQ8IZ52 775 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 BRIX1Q8TDN6 353 aaKnown RBP6.73□□□□□ -1.33
LTN1-206ENST00000486427 SNX19Q92543 992 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 CNPPD1Q9BV87 410 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 RSAD1Q9HA92 442 aa6.73□□□□□ -1.33
LTN1-206ENST00000486427 M0QYG6 137 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 SRGNP10124 158 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 PPP3CBP16298 524 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 BMP5P22003 454 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 CLK3P49761 638 aaKnown RBP6.72□□□□□ -1.33
LTN1-206ENST00000486427 HNRNPMP52272 730 aaKnown RBP eCLIP6.72□□□□□ -1.33
LTN1-206ENST00000486427 SOX8P57073 446 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 KHDC1LQ5JSQ8 128 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 FAM102BQ5T8I3 360 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 EMC10Q5UCC4 262 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 CXorf57Q6NSI4 855 aaKnown RBP6.72□□□□□ -1.33
LTN1-206ENST00000486427 VWA1Q6PCB0 445 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 PCSK9Q8NBP7 692 aaKnown RBP6.72□□□□□ -1.33
LTN1-206ENST00000486427 RUNDC1Q96C34 613 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 CPA4Q9UI42 421 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 DMTF1Q9Y222 760 aa6.72□□□□□ -1.33
LTN1-206ENST00000486427 A0A088AWK7 358 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 KIAA0355O15063 1070 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 DNAJB5O75953 348 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 GNAI2P04899 355 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 NPTX2P47972 431 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 HLXQ14774 488 aaPredicted RBP6.71□□□□□ -1.34
LTN1-206ENST00000486427 ZNF169Q14929 603 aaPredicted RBP6.71□□□□□ -1.34
LTN1-206ENST00000486427 SMN1Q16637 294 aaKnown RBP6.71□□□□□ -1.34
LTN1-206ENST00000486427 OVCH2Q7RTZ1 564 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 FAM9AQ8IZU1 332 aaPredicted RBP6.71□□□□□ -1.34
LTN1-206ENST00000486427 FAM46DQ8NEK8 389 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 MRGPRX1Q96LB2 322 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 PRDM13Q9H4Q3 707 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 FOXJ2Q9P0K8 574 aa6.71□□□□□ -1.34
LTN1-206ENST00000486427 MGST3O14880 152 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 YY2O15391 372 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 PROM1O43490 865 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 PEX1O43933 1283 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 CXCR5P32302 372 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 SIM1P81133 766 aaPredicted RBP6.7□□□□□ -1.34
LTN1-206ENST00000486427 MRPS35P82673 323 aaKnown RBP6.7□□□□□ -1.34
LTN1-206ENST00000486427 PRR16Q569H4 304 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 TCEAL8Q8IYN2 117 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 MYCBPAPQ8TBZ2 947 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 ZG16BQ96DA0 208 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 MTFMTQ96DP5 389 aaKnown RBP6.7□□□□□ -1.34
LTN1-206ENST00000486427 SIK2Q9H0K1 926 aa6.7□□□□□ -1.34
LTN1-206ENST00000486427 SARS2Q9NP81 518 aaKnown RBP6.7□□□□□ -1.34
LTN1-206ENST00000486427 A0A0B4J269 797 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 TSPAN6O43657 245 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 TUSC2O75896 110 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 UNC5CO95185 931 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 PIM1P11309 404 aaPredicted RBP6.69□□□□□ -1.34
LTN1-206ENST00000486427 FOLR3P41439 243 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 NDUFV1P49821 464 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 TUBB3Q13509 450 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 FGL2Q14314 439 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 KIAA0895LQ68EN5 471 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 NXNQ6DKJ4 435 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 DAAM2Q86T65 1068 aa6.69□□□□□ -1.34
LTN1-206ENST00000486427 MAGEB6Q8N7X4 407 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms