RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 PRAMEF12O95522 483 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 GCFC2P16383 781 aaKnown RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 ELF1P32519 619 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 ME1P48163 572 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 KPNA1P52294 538 aaPredicted RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 PRPF4BQ13523 1007 aaKnown RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 ZNF174Q15697 407 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 SOWAHCQ53LP3 525 aaPredicted RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 SH3PXD2AQ5TCZ1 1133 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 TPGS2Q68CL5 300 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 SYNPOQ8N3V7 929 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 KRI1Q8N9T8 703 aaKnown RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 ENGASEQ8NFI3 743 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 RIN3Q8TB24 985 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 EZH1Q92800 747 aaPredicted RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 COL26A1Q96A83 441 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 C18orf25Q96B23 403 aaPredicted RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 MSANTD3Q96H12 275 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 ZNF512Q96ME7 567 aaPredicted RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 MTMR9Q96QG7 549 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 NAP1L4Q99733 375 aaKnown RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 VPS45Q9NRW7 570 aa10.05□□□□□ -0.8
CCDC142-208ENST00000486335 FBXO2Q9UK22 296 aaPredicted RBP10.05□□□□□ -0.8
CCDC142-208ENST00000486335 HELZ2Q9BYK8 2649 aaKnown RBP10.04□□□□□ -0.8
CCDC142-208ENST00000486335 LNP1A1A4G5 178 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 BCLAF3A2AJT9 711 aaKnown RBP10.04□□□□□ -0.8
CCDC142-208ENST00000486335 PODXLO00592 558 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 SYN3O14994 580 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 MED24O75448 989 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 OR4Q2P0C623 313 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 XRCC6P12956 609 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC142-208ENST00000486335 ATP2B1P20020 1258 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 MARCKSP29966 332 aaPredicted RBP10.04□□□□□ -0.8
CCDC142-208ENST00000486335 PRPHP41219 470 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 ZNF252P-AS1Q0IIN9 211 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 TMEM196Q5HYL7 178 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 TAS1R3Q7RTX0 852 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 CSGALNACT1Q8TDX6 532 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 SUSD3Q96L08 255 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 UROC1Q96N76 676 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 IL21Q9HBE4 155 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 HPS4Q9NQG7 708 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 LHX6Q9UPM6 363 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 HPSEQ9Y251 543 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 YIPF1Q9Y548 306 aa10.04□□□□□ -0.8
CCDC142-208ENST00000486335 ITPR1Q14643 2758 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 PATE3B3GLJ2 98 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 TRAPPC3O43617 180 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 AKAP3O75969 853 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 LETM1O95202 739 aaPredicted RBP10.03□□□□□ -0.8
CCDC142-208ENST00000486335 KCNE1P15382 129 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 LIG1P18858 919 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 WEE1P30291 646 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 MCM7P33993 719 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 MAPK6Q16659 721 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 CTXN3Q4LDR2 81 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 RESP18Q5W5W9 173 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 C1orf228Q6PIY5 440 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 SHC4Q6S5L8 630 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 IGSF10Q6WRI0 2623 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 CATSPER3Q86XQ3 398 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 TTC9BQ8N6N2 239 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 LEMD2Q8NC56 503 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 DDX12PQ92771 950 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 E2F7Q96AV8 911 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 TMEM209Q96SK2 561 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 FAM83CQ9BQN1 747 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 EDEM2Q9BV94 578 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 GPR88Q9GZN0 384 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 SMG9Q9H0W8 520 aaKnown RBP10.03□□□□□ -0.8
CCDC142-208ENST00000486335 CDT1Q9H211 546 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 TMEM60Q9H2L4 133 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 ASAH2Q9NR71 780 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 TMEM63CQ9P1W3 806 aa10.03□□□□□ -0.8
CCDC142-208ENST00000486335 GCN1Q92616 2671 aaKnown RBP10.03□□□□□ -0.8
CCDC142-208ENST00000486335 APC2O95996 2303 aa10.02□□□□□ -0.8
CCDC142-208ENST00000486335 PDCD11Q14690 1871 aaKnown RBP10.02□□□□□ -0.8
CCDC142-208ENST00000486335 TMEM8BA6NDV4 472 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 TRDMT1O14717 391 aaKnown RBP10.02□□□□□ -0.81
CCDC142-208ENST00000486335 HYAL3O43820 417 aaPredicted RBP10.02□□□□□ -0.81
CCDC142-208ENST00000486335 SOAT2O75908 522 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 OAZ2O95190 189 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 ZIC2O95409 532 aaPredicted RBP10.02□□□□□ -0.81
CCDC142-208ENST00000486335 CAVIN2O95810 425 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 EGFP01133 1207 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 CEACAM1P13688 526 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 CYP11B2P19099 503 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 CSRP1P21291 193 aaKnown RBP10.02□□□□□ -0.81
CCDC142-208ENST00000486335 GRM5P41594 1212 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 IRX4P78413 519 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 FAM160A1Q05DH4 1040 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 DUSP4Q13115 394 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 IL17AQ16552 155 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 ECM1Q16610 540 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 ATF7IP2Q5U623 682 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 IQCEQ6IPM2 695 aa10.02□□□□□ -0.81
CCDC142-208ENST00000486335 DNAJB7Q7Z6W7 309 aaPredicted RBP10.02□□□□□ -0.81
CCDC142-208ENST00000486335 ELOA2Q8IYF1 753 aaPredicted RBP10.02□□□□□ -0.81
CCDC142-208ENST00000486335 SLFN12Q8IYM2 578 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms