RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 BIRC2Q13490 618 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 FAM47CQ5HY64 1035 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 IQCKQ8N0W5 287 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 PPFIBP2Q8ND30 876 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 SCYL1Q96KG9 808 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 MECRQ9BV79 373 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 KCTD10Q9H3F6 313 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 KLK14Q9P0G3 267 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 SLC9A2Q9UBY0 812 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 NAALADL1Q9UQQ1 740 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 SNCAIPQ9Y6H5 919 aa5.26□□□□□ -1.57
CCDC39-204ENST00000476379 USP34Q70CQ2 3546 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 I3L4J1 428 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PDHXO00330 501 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 FAM155BO75949 473 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RNF8O76064 485 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TROVE2P10155 538 aaKnown RBP eCLIP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GAP43P17677 238 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ADRA1DP25100 572 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 NPTX2P47972 431 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PPP4CP60510 307 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ADCY2Q08462 1091 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TRIM32Q13049 653 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 COL9A2Q14055 689 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TFDP1Q14186 410 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CCL14Q16627 93 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GLE1Q53GS7 698 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 C6orf163Q5TEZ5 329 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GPAT2Q6NUI2 795 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RGS9BPQ6ZS82 235 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ARHGEF18Q6ZSZ5 1173 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RAPH1Q70E73 1250 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PTAR1Q7Z6K3 402 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RHOT2Q8IXI1 618 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CYP4X1Q8N118 509 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 DNAAF3Q8N9W5 541 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RBBP8NLQ8NC74 664 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ARMC2Q8NEN0 867 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TTC8Q8TAM2 541 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RAB3IL1Q8TBN0 382 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ABTB1Q969K4 478 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SGSM3Q96HU1 749 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SENP7Q9BQF6 1050 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 THTPAQ9BU02 230 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 C17orf75Q9HAS0 396 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RAB6BQ9NRW1 208 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 WDR70Q9NW82 654 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 DLGAP2Q9P1A6 1054 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TJP2Q9UDY2 1190 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GTF3C4Q9UKN8 822 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 AGO2Q9UKV8 859 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PFASO15067 1338 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GOLGA8QA0A0J9YX86 632 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 A0A1W2PQJ5 194 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GOLGA8OA6NCC3 632 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GOLGA8NF8WBI6 632 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 P4HBP07237 508 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 KRT16P08779 473 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 LCP1P13796 627 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ETS2P15036 469 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ITGB5P18084 799 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 NELFEP18615 380 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 MAGEA4P43358 317 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CLCN3P51790 818 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ATN1P54259 1190 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SARNPP82979 210 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 NFX1Q12986 1120 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 DCAF12L1Q5VU92 463 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PCNX4Q63HM2 1172 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 LAYNQ6UX15 382 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 LRRC6Q86X45 466 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ARID3BQ8IVW6 561 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SPATA18Q8TC71 538 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SLC26A7Q8TE54 656 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ZNF395Q9H8N7 513 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GDF3Q9NR23 364 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CPSF2Q9P2I0 782 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 USP15Q9Y4E8 981 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TTC28Q96AY4 2481 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ARID1BQ8NFD5 2236 aaPredicted RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 BTBD19C9JJ37 291 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SCAMP3O14828 347 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 RIPK2O43353 540 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 DNAJC6O75061 913 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TOP3BO95985 862 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 GBP1P32455 592 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 HSPA9P38646 679 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 TNFSF9P41273 254 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 CXCR3P49682 368 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PRKCEQ02156 737 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ITKQ08881 620 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 MMRN1Q13201 1228 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 BYSLQ13895 437 aaKnown RBP5.25□□□□□ -1.57
CCDC39-204ENST00000476379 SPARCL1Q14515 664 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ZNF568Q3ZCX4 644 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 C16orf46Q6P387 395 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 MFSD7Q6UXD7 560 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 OTOP1Q7RTM1 612 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 ARMC9Q7Z3E5 817 aa5.25□□□□□ -1.57
CCDC39-204ENST00000476379 PCGF5Q86SE9 256 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms