RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 TEX13BQ9BXU2 312 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 TMEM8AQ9HCN3 771 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 V9GYQ6 96 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 SMAPO00193 183 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 NLRP11P59045 1033 aaKnown RBP18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 RABL6Q3YEC7 729 aaPredicted RBP18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 KLHDC7AQ5VTJ3 777 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 BRINP3Q76B58 766 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 ZNF467Q7Z7K2 595 aaPredicted RBP18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 DDX53Q86TM3 631 aaKnown RBP18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 FAM71DQ8N9W8 422 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 C17orf80Q9BSJ5 609 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 SLC40A1Q9NP59 571 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 PDS5AQ29RF7 1337 aaKnown RBP18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 COILP38432 576 aaPredicted RBP18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 DTNBP1Q96EV8 351 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 WNK4Q96J92 1243 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 MRGBPQ9NV56 204 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 PSD3Q9NYI0 1048 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 TFR2Q9UP52 801 aa18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.56
LPCAT1-202ENST00000475622 LOC102724159A0A0B4J2E5 919 aa18.52■□□□□ 0.55
LPCAT1-202ENST00000475622 NR3C2P08235 984 aa18.52■□□□□ 0.55
LPCAT1-202ENST00000475622 CLK1P49759 484 aaKnown RBP18.52■□□□□ 0.55
LPCAT1-202ENST00000475622 PLOD1Q02809 727 aaPredicted RBP18.52■□□□□ 0.55
LPCAT1-202ENST00000475622 DNAJC3Q13217 504 aa18.52■□□□□ 0.55
LPCAT1-202ENST00000475622 PWP2Q15269 919 aaKnown RBP18.52■□□□□ 0.55
LPCAT1-202ENST00000475622 SLC7A14Q8TBB6 771 aa18.52■□□□□ 0.55
LPCAT1-202ENST00000475622 KCNK10P57789 538 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 WASHC5Q12768 1159 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 TRIM28Q13263 835 aaKnown RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SBK1Q52WX2 424 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 PI4K2AQ9BTU6 479 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SMARCAD1Q9H4L7 1026 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SLC39A10Q9ULF5 831 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 GPD1P21695 349 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 PTRHD1Q6GMV3 140 aaKnown RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SNX31Q8N9S9 440 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 UBA3Q8TBC4 463 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 ZNF669Q96BR6 464 aaPredicted RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 PRR23D1E9PI22 279 aaPredicted RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 CTSHP09668 335 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 PRR23D2P0DMB1 279 aaPredicted RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 GTF2H1P32780 548 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SKOR1P84550 965 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 AASDHQ4L235 1098 aaPredicted RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SGO1Q5FBB7 561 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 ARID3BQ8IVW6 561 aaPredicted RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 PPIL6Q8IXY8 311 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.556e-6■■■■■ 38.2
LPCAT1-202ENST00000475622 TADA2AO75478 443 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 MTFR1Q15390 333 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 DCAF6Q58WW2 860 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SETD3Q86TU7 594 aaPredicted RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 HPS4Q9NQG7 708 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 DLGAP2Q9P1A6 1054 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 LSM7Q9UK45 103 aaKnown RBP18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 ZBTB39O15060 712 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 NFIXQ14938 502 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 GJB7Q6PEY0 223 aa18.51■□□□□ 0.55
LPCAT1-202ENST00000475622 SLC26A4O43511 780 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 MEI1Q5TIA1 1274 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 HORMAD1Q86X24 394 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 FEZF2Q8TBJ5 459 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 CNDP1Q96KN2 507 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 MUC3BQ9H195 1237 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 TRIM49D1C9J1S8 452 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 RGS4P49798 205 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 GEMIN4P57678 1058 aaKnown RBP18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 CDC42EP1Q00587 391 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 PRKCEQ02156 737 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 MICU2Q8IYU8 434 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 SCN3BQ9NY72 215 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 PRR12Q9ULL5 1215 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 PCDHB8Q9UN66 801 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 EIF3DO15371 548 aaKnown RBP eCLIP18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 CLASP2O75122 1294 aaKnown RBP18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 HSD17B3P37058 310 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 TWF1Q12792 350 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 MKNK1Q9BUB5 465 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 CXorf56Q9H5V9 222 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 PTGER2P43116 358 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 ANTXR2P58335 489 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 CEP170Q5SW79 1584 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 P3H2Q8IVL5 708 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 VPS33BQ9H267 617 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 RIC8BQ9NVN3 520 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 H2AFY2Q9P0M6 372 aaPredicted RBP18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 NYAP2Q9P242 653 aa18.5■□□□□ 0.55
LPCAT1-202ENST00000475622 KRT87PA6NCN2 255 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 NIF3L1Q9GZT8 377 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 METTL5Q9NRN9 209 aaKnown RBP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 ALDH1A1P00352 501 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 ST8SIA6P61647 398 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 TMEM62Q0P6H9 643 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 CYLC2Q14093 348 aaPredicted RBP18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 WLSQ5T9L3 541 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 KCNB2Q92953 911 aa18.49■□□□□ 0.55
LPCAT1-202ENST00000475622 APOL5Q9BWW9 433 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms